Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RNU6-336P-201ENST00000364891 107 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 Y_RNA.373-201ENST00000365600 103 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 Y_RNA.480-201ENST00000384364 102 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 MIR186-201ENST00000384988 86 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 SNORD115-47-201ENST00000391226 86 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 U6atac.2-201ENST00000408644 118 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 OR9R1P-201ENST00000412200 877 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 EIF1AXP1-201ENST00000419267 435 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AL591043.1-201ENST00000432461 424 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AC007969.2-201ENST00000441891 191 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 SNORD13-201ENST00000459299 104 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AC092989.1-201ENST00000481235 277 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 SNORA14.1-201ENST00000516113 141 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 RNU6-718P-201ENST00000516166 105 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 CENPUP1-201ENST00000526649 1202 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 MIR4498-201ENST00000577599 66 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 RPL30P11-203ENST00000598995 310 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AL162413.1-201ENST00000603198 110 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AC073410.2-201ENST00000603240 332 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AL096840.1-201ENST00000603287 93 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 Z82243.1-201ENST00000609432 473 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 MIR8081-201ENST00000611533 95 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AC024581.2-201ENST00000619986 252 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 MIR7157-201ENST00000635801 60 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 MIR1321-201ENST00000637766 79 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 OR4G1P-203ENST00000641984 1631 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 RNU6-1252P-201ENST00000363054 104 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 RNU6-105P-201ENST00000363909 104 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 RNA5SP190-201ENST00000365222 118 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 RNU1-57P-201ENST00000384491 166 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 FGF7P8-201ENST00000402994 292 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AIMP1P2-201ENST00000425294 312 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 TIMM9P3-201ENST00000428659 274 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AC243964.1-201ENST00000441814 261 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 RPL39P29-201ENST00000447779 157 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 HMGB3P17-201ENST00000504195 649 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 RNU6-189P-201ENST00000516120 101 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 RNU2-53P-201ENST00000516257 147 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AP005902.1-201ENST00000521358 186 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 RNU6-323P-201ENST00000521915 107 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AC104576.1-201ENST00000524225 88 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AC025423.5-201ENST00000550230 219 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AC093249.1-201ENST00000567049 203 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AL713866.2-201ENST00000603579 219 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AL138963.2-201ENST00000605137 226 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 CTHRC1P1-201ENST00000605383 469 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 RNU6-89P-201ENST00000606519 100 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AL357078.3-201ENST00000607528 618 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 RNU6-91P-201ENST00000607774 107 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 uc_338.15-201ENST00000615470 191 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 DUXAP9-208ENST00000622815 614 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 AC024614.3-201ENST00000637860 256 ntBASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
NKX2-6A6NCS4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 snoU2_19.1-201ENST00000362361 80 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 RNU6-451P-201ENST00000362921 107 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 RNU6-457P-201ENST00000363999 107 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 RNU6-332P-201ENST00000391193 108 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AL591034.2-201ENST00000402839 359 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AL117339.3-201ENST00000418733 162 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 SEPT14P3-201ENST00000439401 183 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AL732372.2-207ENST00000445840 183 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 SEPT14P2-201ENST00000453405 183 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AK3P2-201ENST00000507976 429 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 SEPT14P4-201ENST00000513445 186 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 FO082796.1-201ENST00000523795 183 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms