Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RNU6-1-201ENST00000383898 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 SNORA22-201ENST00000383907 134 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-48P-201ENST00000384161 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-36P-201ENST00000384172 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-4P-201ENST00000384205 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-5P-201ENST00000384238 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-3P-201ENST00000384314 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-16P-201ENST00000384385 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-15P-201ENST00000384534 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 SNORA22C-201ENST00000384614 134 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-2-201ENST00000384627 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-29P-201ENST00000384637 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-9-201ENST00000384776 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-33P-201ENST00000384793 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AL161935.2-201ENST00000414627 60 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 MTCYBP39-201ENST00000437562 491 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AL512286.1-201ENST00000439244 400 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 HSPE1P9-201ENST00000440046 311 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RPS29P28-201ENST00000446439 141 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 OR2AQ1P-201ENST00000451972 200 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AC115990.1-201ENST00000526957 301 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 PCMTD1P2-201ENST00000565017 355 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 SNORA59B-202ENST00000578183 701 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-6P-201ENST00000606623 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AL391834.2-201ENST00000609982 546 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AC027807.2-201ENST00000616099 408 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 AC100821.1-201ENST00000523153 2479 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-428P-201ENST00000362942 107 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-179P-201ENST00000363350 107 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-336P-201ENST00000364891 107 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 SNORD115-7-201ENST00000365306 82 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-169P-201ENST00000365336 107 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-142P-201ENST00000384019 107 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-116P-201ENST00000384042 109 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-45P-201ENST00000384471 107 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 RPL23AP32-201ENST00000395315 459 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 MTCYBP2-201ENST00000407745 171 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-293P-201ENST00000411259 106 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 MTCO3P41-201ENST00000414801 328 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC098592.1-201ENST00000419352 333 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 EIF1P1-201ENST00000421436 341 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AL354692.1-201ENST00000423044 315 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 MTCYBP1-201ENST00000454315 1119 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 SNRPGP7-201ENST00000469016 106 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 HMGN2P9-201ENST00000476875 229 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC022447.4-201ENST00000504053 364 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC034244.1-201ENST00000507687 207 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC005741.1-201ENST00000511094 432 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC019176.1-201ENST00000518519 225 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 ZNF321P-202ENST00000550843 495 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 MTND1P8-201ENST00000571424 950 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AP003465.2-201ENST00000602571 373 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC112191.3-201ENST00000604371 277 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 SNORD114-21-201ENST00000606412 72 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC091304.9-201ENST00000612091 226 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC136475.10-201ENST00000620253 385 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC009878.1-201ENST00000621819 340 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AL078595.3-201ENST00000623815 1166 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC006927.3-201ENST00000638789 384 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 AC245060.5-201ENST00000610778 3293 ntBASIC0.81□□□□□ -2.28
TRAV41A0A0B4J266 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 RNU1-22P-201ENST00000363334 158 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 SNORD32A-201ENST00000364805 84 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 Y_RNA.324-201ENST00000365165 102 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 MIR513A1-201ENST00000385138 129 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 MRPL42P2-201ENST00000403169 426 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 RNA5SP201-201ENST00000410316 124 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC106883.1-201ENST00000418805 562 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AL590135.1-201ENST00000422215 156 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC019205.3-201ENST00000424573 156 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AL356583.2-201ENST00000426536 280 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC010975.2-201ENST00000427781 588 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC104850.1-201ENST00000435940 476 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 GTF2IP13-201ENST00000438487 386 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC016700.2-201ENST00000446011 156 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 MTND1P18-201ENST00000448191 573 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 snoU13.30-201ENST00000458951 104 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 RPL9P9-202ENST00000466501 579 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms