Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AL109809.4-201ENST00000603520 2185 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AC073346.2-201ENST00000624724 2058 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.15□□□□□ -1.9
PCDHA3Q9Y5H8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.15□□□□□ -1.9
PCDHA3Q9Y5H8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 RNU5B-2P-201ENST00000363036 113 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 Y_RNA.158-201ENST00000363651 101 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 RNA5SP267-201ENST00000364893 126 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 SNORA29-201ENST00000384183 140 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 Y_RNA.504-201ENST00000384481 104 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 MIR625-201ENST00000385047 85 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 U3.26-201ENST00000391236 204 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 AL512633.1-201ENST00000399931 655 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 MRPL42P3-201ENST00000401492 326 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 snoU13.30-201ENST00000458951 104 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 RPL30P1-201ENST00000488676 339 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 AC105758.1-201ENST00000506038 399 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 RNU6-475P-201ENST00000516073 104 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 SNORA70.24-201ENST00000517233 118 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 AC079598.5-201ENST00000547460 117 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 AC021231.3-201ENST00000558497 370 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 AL450472.1-202ENST00000637286 180 ntBASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHA3Q9Y5H8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 Y_RNA.39-201ENST00000362620 98 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 Y_RNA.80-201ENST00000362996 102 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 SNORD115-32-201ENST00000364079 82 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 SNORA63C-201ENST00000364578 129 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 Y_RNA.314-201ENST00000365114 102 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 Y_RNA.364-201ENST00000365532 101 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 RNU6-1140P-201ENST00000410517 106 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 AC138623.1-201ENST00000418060 216 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 AC005326.1-201ENST00000429197 123 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 GPM6BP3-201ENST00000442797 145 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 AL353705.4-201ENST00000449661 238 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 RAC1P5-201ENST00000512182 576 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 RNA5SP76-201ENST00000516277 87 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 RNU4-77P-201ENST00000516692 156 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 AC144568.1-201ENST00000520139 137 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 MIR5680-201ENST00000577577 84 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 AL360085.1-201ENST00000604713 532 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 AC100812.1-201ENST00000607622 580 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 AC002064.3-201ENST00000623448 346 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 AL606534.2-204ENST00000635008 178 ntBASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA3Q9Y5H8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AC099654.7-201ENST00000635788 2127 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 MIR22-201ENST00000362190 85 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 RNU6-529P-201ENST00000363383 104 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 Y_RNA.405-201ENST00000383979 100 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 Y_RNA.451-201ENST00000384200 100 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 Y_RNA.524-201ENST00000384564 100 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 Y_RNA.561-201ENST00000384694 100 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 MIR23A-201ENST00000385245 73 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AL590004.2-201ENST00000404787 371 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 SNRPGP7-201ENST00000469016 106 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 RNU6-327P-201ENST00000516270 127 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 SCARNA11.3-201ENST00000517276 130 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 MIR3136-201ENST00000583498 78 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 MIR5195-201ENST00000583555 115 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AC011471.1-201ENST00000585766 187 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AC010928.2-201ENST00000588017 287 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 RPL23AP78-201ENST00000599928 470 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AL161756.2-201ENST00000604597 246 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AL137843.1-201ENST00000605078 385 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AL359198.2-201ENST00000611836 194 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 RMST_6.1-201ENST00000611980 203 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AC087588.2-201ENST00000617667 426 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AC137590.2-201ENST00000619709 240 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 AC138305.3-201ENST00000624988 240 ntBASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHA3Q9Y5H8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms