Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP3Q9Y3E7 MIR548AI-201ENST00000579940 88 ntBASIC4.6□□□□□ -1.67
CHMP3Q9Y3E7 AC069200.1-201ENST00000609511 323 ntBASIC4.6□□□□□ -1.67
CHMP3Q9Y3E7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
CHMP3Q9Y3E7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.6□□□□□ -1.67
CHMP3Q9Y3E7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP3Q9Y3E7 AC106871.1-201ENST00000568324 3102 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 RNU6-600P-201ENST00000362524 99 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 RNU6-873P-201ENST00000363833 107 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 Y_RNA.230-201ENST00000364348 109 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 MIR549A-201ENST00000385268 96 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 ATP5A1P2-201ENST00000412323 255 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AC024067.1-201ENST00000426199 223 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AC125238.1-201ENST00000448842 249 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 RPL37P4-201ENST00000448908 268 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AC106707.2-201ENST00000484182 374 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 RPS29P20-201ENST00000489592 171 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 RPL30P5-201ENST00000494923 336 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AC005921.1-201ENST00000510589 286 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AC023141.12-201ENST00000512399 199 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 RNU2-58P-201ENST00000516403 183 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 SNORA31.23-201ENST00000517219 133 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 MIR3145-201ENST00000580727 82 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AC012468.1-201ENST00000604888 430 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 U3.45-201ENST00000607547 219 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 AC073349.3-201ENST00000617616 186 ntBASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHMP3Q9Y3E7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 RNA5SP119-201ENST00000362715 117 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 Y_RNA.304-201ENST00000365011 112 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 RNU6-1035P-201ENST00000384477 107 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 SNORA46.1-201ENST00000391069 153 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 Y_RNA.597-201ENST00000410463 100 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 AL451074.5-201ENST00000415894 435 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 IFNA11P-201ENST00000446352 526 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 AC074133.1-201ENST00000515696 183 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 AC016256.1-201ENST00000547971 354 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 CR383656.8-201ENST00000549046 145 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 AC048347.1-201ENST00000624621 427 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 AP000553.6-201ENST00000641242 118 ntBASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CHMP3Q9Y3E7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 SNORA63.1-201ENST00000362493 131 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 SNORA31-201ENST00000362607 130 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 MIR218-2-201ENST00000385006 110 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 RNU2-37P-201ENST00000410695 177 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 AL390729.2-201ENST00000416137 156 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 OOSP1P1-201ENST00000423265 274 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 PRSS3P4-201ENST00000453323 162 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 HMGN2P7-201ENST00000456186 273 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 RNU6-581P-201ENST00000516214 105 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 RNU6-1282P-201ENST00000516735 96 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 AC019176.2-201ENST00000611579 315 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 AC084757.4-201ENST00000616350 526 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 AC092628.2-201ENST00000622492 339 ntBASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHMP3Q9Y3E7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 AL161912.2-201ENST00000565707 3007 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 SNORD9-201ENST00000362566 104 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 RNA5SP197-201ENST00000363357 119 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 SNORD46.1-201ENST00000364139 104 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 Y_RNA.217-201ENST00000364214 105 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 RNU5E-9P-201ENST00000411164 104 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 AL358075.3-201ENST00000426289 226 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 HMGB3P8-201ENST00000449709 577 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 Y_RNA.641-201ENST00000459414 105 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 RPS27AP10-201ENST00000496103 208 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 AC016632.1-201ENST00000503994 196 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 SNORA70.18-201ENST00000516696 98 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 AL360157.1-201ENST00000565962 87 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 MIR3944-201ENST00000581277 108 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 AL451007.1-201ENST00000595491 289 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 AC020914.4-201ENST00000597690 277 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 AL356157.2-201ENST00000605122 111 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 AL359198.2-201ENST00000611836 194 ntBASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CHMP3Q9Y3E7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms