Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 AC005840.1-201ENST00000498412 377 ntBASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 RNU6-189P-201ENST00000516120 101 ntBASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 CENPUP1-201ENST00000526649 1202 ntBASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 AC022880.1-201ENST00000534017 973 ntBASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 AC090115.3-201ENST00000553218 849 ntBASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 MIR5583-1-201ENST00000580941 59 ntBASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 RNU6-85P-201ENST00000605989 107 ntBASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 AL627309.6-201ENST00000606857 840 ntBASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 AC009233.1-201ENST00000616477 371 ntBASIC3.86□□□□□ -1.79
SHROOM4Q9ULL8 RNU6-105P-201ENST00000363909 104 ntBASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 RNA5SP219-201ENST00000390940 113 ntBASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 RN7SKP158-201ENST00000410453 326 ntBASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 AL358453.1-201ENST00000422522 250 ntBASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 RNU6-1281P-201ENST00000516223 105 ntBASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 RNU6-835P-201ENST00000516974 104 ntBASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 VN1R107P-201ENST00000601784 209 ntBASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 AC012557.2-201ENST00000605919 418 ntBASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 DISC2.1-201ENST00000612827 205 ntBASIC3.85□□□□□ -1.79
SHROOM4Q9ULL8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.84□□□□□ -1.79
SHROOM4Q9ULL8 RNU6-655P-201ENST00000362858 107 ntBASIC3.84□□□□□ -1.8
SHROOM4Q9ULL8 RNU6-1210P-201ENST00000363775 107 ntBASIC3.84□□□□□ -1.8
SHROOM4Q9ULL8 POLHP1-201ENST00000411806 470 ntBASIC3.84□□□□□ -1.8
SHROOM4Q9ULL8 AC008267.5-201ENST00000424928 265 ntBASIC3.84□□□□□ -1.8
SHROOM4Q9ULL8 AC013470.1-201ENST00000453438 462 ntBASIC3.84□□□□□ -1.8
SHROOM4Q9ULL8 ZNF519P2-201ENST00000557032 169 ntBASIC3.84□□□□□ -1.8
SHROOM4Q9ULL8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.84□□□□□ -1.8
SHROOM4Q9ULL8 RNU6-212P-201ENST00000362642 104 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 Y_RNA.372-201ENST00000365599 102 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 AP1B1P2-201ENST00000416196 106 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 AC092473.1-201ENST00000441098 221 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 snoU13.14-201ENST00000459372 104 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 RPL30P1-201ENST00000488676 339 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 AC098799.2-201ENST00000509466 868 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 AC092954.2-201ENST00000609103 430 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 U4atac.1-201ENST00000618345 95 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 AC103705.1-201ENST00000619013 241 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 AC010297.1-201ENST00000623948 149 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 MAPK10-266ENST00000641066 6555 ntBASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SHROOM4Q9ULL8 MIR7-2-201ENST00000384970 110 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 CBX3P9-201ENST00000402326 552 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 AL031274.1-201ENST00000450334 232 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 RNU7-138P-201ENST00000459479 64 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 AL157687.1-201ENST00000554853 619 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 SUB1P3-201ENST00000564581 315 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 EIF1P4-201ENST00000572664 335 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 AF250324.2-201ENST00000608299 610 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 AL159153.1-201ENST00000619688 317 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 MIR1321-201ENST00000637766 79 ntBASIC3.82□□□□□ -1.8
SHROOM4Q9ULL8 MIR95-201ENST00000385072 81 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 SNORA67.5-201ENST00000391036 107 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 RNU6-648P-201ENST00000410190 107 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AL589823.1-201ENST00000429577 183 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 MTND1P34-201ENST00000438556 671 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AC243964.1-201ENST00000441814 261 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AC008571.1-201ENST00000467232 300 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 CCDC34P1-201ENST00000507441 517 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 Y_RNA.655-201ENST00000515919 96 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 RNU6-586P-201ENST00000517265 104 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AC087854.1-201ENST00000519706 414 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AC115990.1-201ENST00000526957 301 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 BNIP3P16-201ENST00000589779 534 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AL713866.2-201ENST00000603579 219 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AL670379.2-201ENST00000604983 252 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 AC123912.5-201ENST00000605470 343 ntBASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SHROOM4Q9ULL8 RNU6-428P-201ENST00000362942 107 ntBASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 USP9YP27-201ENST00000418455 438 ntBASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 AC027124.2-201ENST00000428249 105 ntBASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 AP000852.1-201ENST00000472460 573 ntBASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 Y_RNA.654-201ENST00000497848 106 ntBASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 AC091435.1-201ENST00000505442 584 ntBASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 AK3P2-201ENST00000507976 429 ntBASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 RNU6-1038P-201ENST00000516516 104 ntBASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 AC092747.3-201ENST00000603769 301 ntBASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 AL356157.2-201ENST00000605122 111 ntBASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHROOM4Q9ULL8 RNA5SP190-201ENST00000365222 118 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 RPS29P13-201ENST00000402041 169 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 BTF3P4-201ENST00000418852 495 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 Y_RNA.704-201ENST00000516851 102 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms