Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AC012308.1-201ENST00000451232 178 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AC010099.1-201ENST00000455434 375 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 snoU13.6-201ENST00000458785 104 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 RPL30P12-201ENST00000474666 353 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 RPL30P14-201ENST00000482744 348 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AC115990.1-201ENST00000526957 301 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-91P-201ENST00000607774 107 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AC004792.1-201ENST00000614523 137 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CDC42EP3Q9UKI2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
CDC42EP3Q9UKI2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 AC004944.1-201ENST00000517807 3059 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 GABRG2-229ENST00000641017 3628 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 Y_RNA.180-201ENST00000363867 113 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 Y_RNA.297-201ENST00000364950 91 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 AL033519.2-201ENST00000403958 392 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 AC112220.1-201ENST00000434628 355 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 RNU7-23P-201ENST00000459465 62 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 AC011471.1-201ENST00000585766 187 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 AC005520.5-201ENST00000613926 164 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.27□□□□□ -1.89
CDC42EP3Q9UKI2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 BX322639.1-202ENST00000423987 2213 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 RNU5F-3P-201ENST00000363767 117 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-961P-201ENST00000363893 105 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-20P-201ENST00000384106 107 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-748P-201ENST00000384648 107 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 MIR1298-201ENST00000408783 112 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 AC019205.3-201ENST00000424573 156 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 RPS15AP5-201ENST00000436276 388 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 AC007395.1-201ENST00000451333 677 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 AL138752.1-201ENST00000452964 351 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 RNU7-170P-201ENST00000459303 61 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 AC117440.1-201ENST00000474107 571 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 AC090525.1-201ENST00000479116 478 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 RPL7P47-201ENST00000497299 556 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 SNORA40.9-201ENST00000515895 93 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 SNORA31.16-201ENST00000516773 139 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 RNU2-31P-201ENST00000516954 155 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 IGKV2-38-201ENST00000517443 247 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 MIR5047-201ENST00000579212 100 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 AL109809.4-201ENST00000603520 2185 ntBASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDC42EP3Q9UKI2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 Y_RNA.44-201ENST00000362676 108 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 Y_RNA.76-201ENST00000362931 109 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 SNORD35B-201ENST00000363660 87 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-873P-201ENST00000363833 107 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 MIR183-201ENST00000384958 110 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 SNORA53-201ENST00000391141 249 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 PTGES3P4-201ENST00000426243 356 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 AL591419.1-201ENST00000427423 339 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 PRELID3BP1-201ENST00000457142 540 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 SNRPGP3-201ENST00000469405 227 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 CYCSP23-201ENST00000519781 313 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 AC233702.2-202ENST00000562547 291 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 AC087499.8-201ENST00000578406 226 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms