Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC069240.1-201ENST00000548774 375 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 RNU1-30P-201ENST00000606575 163 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 AC006133.1-201ENST00000617106 264 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 AC008873.1-201ENST00000625051 138 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 SNORD87-201ENST00000364849 89 ntBASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 RNU6-1081P-201ENST00000384537 107 ntBASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 RNA5SP252-201ENST00000391131 119 ntBASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 AC112771.1-201ENST00000463581 102 ntBASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 RPL36AP48-201ENST00000485521 314 ntBASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 AC025445.1-201ENST00000502728 300 ntBASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 RNU1-117P-201ENST00000517041 158 ntBASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 CYCSP29-201ENST00000533731 318 ntBASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 MIR8059-201ENST00000620427 81 ntBASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXD3Q9UJU5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 MIR448-201ENST00000362131 111 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 RNA5SP295-201ENST00000362655 121 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 SNORD116-18-201ENST00000383961 92 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 SNORA67.2-201ENST00000384300 149 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 RNU2-2P-201ENST00000410396 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 HMGN2P7-201ENST00000456186 273 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 SRIP1-201ENST00000489235 288 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 RNU2-4P-201ENST00000606190 192 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.15-201ENST00000611544 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.16-201ENST00000613119 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.12-201ENST00000613778 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.9-201ENST00000615427 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.11-201ENST00000616345 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.2-201ENST00000616535 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.3-201ENST00000617785 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.19-201ENST00000618602 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 RNU2-1-201ENST00000618664 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.6-201ENST00000619225 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.5-201ENST00000619465 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 U2.10-201ENST00000620268 191 ntBASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXD3Q9UJU5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 RNU6-801P-201ENST00000364087 105 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 Y_RNA.287-201ENST00000364853 94 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 Y_RNA.357-201ENST00000365487 109 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 RNU6-449P-201ENST00000383914 107 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 Y_RNA.412-201ENST00000384001 104 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 MIR1183-201ENST00000408856 89 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 RNU6-1077P-201ENST00000410506 102 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 RPS20P10-201ENST00000451209 253 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 AL592156.1-201ENST00000508758 304 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 AC100770.1-201ENST00000532310 322 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 MIR3684-201ENST00000579779 74 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 AC013791.1-201ENST00000616619 62 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 MIR7154-201ENST00000620673 73 ntBASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXD3Q9UJU5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms