Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 RNU4-15P-201ENST00000362613 141 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-37P-201ENST00000362692 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-23P-201ENST00000363283 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-11P-201ENST00000364234 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 SNORD32B-201ENST00000364460 84 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-715P-201ENST00000365204 103 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-25P-201ENST00000383873 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-1-201ENST00000383898 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-48P-201ENST00000384161 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-36P-201ENST00000384172 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-4P-201ENST00000384205 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-5P-201ENST00000384238 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-3P-201ENST00000384314 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-16P-201ENST00000384385 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-15P-201ENST00000384534 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-2-201ENST00000384627 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-29P-201ENST00000384637 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-9-201ENST00000384776 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-33P-201ENST00000384793 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 MIR454-201ENST00000390180 115 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 SNORA17.3-201ENST00000391159 129 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AF228730.1-201ENST00000397972 663 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 MTND3P17-201ENST00000416968 344 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AL669831.1-202ENST00000428504 417 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 GTF2IP13-201ENST00000438487 386 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNA5SP269-201ENST00000459032 137 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AC021146.2-201ENST00000504736 556 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 MTND3P5-201ENST00000512798 333 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-377P-201ENST00000515965 102 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 SNORD27.1-201ENST00000516319 72 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 SNORA18.6-201ENST00000516792 115 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 TRAV32-201ENST00000553993 340 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 MIR3169-201ENST00000578032 83 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AL034555.1-201ENST00000604816 211 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNU6-6P-201ENST00000606623 107 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 AC245060.5-201ENST00000610778 3293 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 ZNF680P1-201ENST00000436625 1469 ntBASIC1.56□□□□□ -2.16
KLHL28Q9NXS3 RNA5SP493-201ENST00000364115 91 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 RNU6-282P-201ENST00000365357 103 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 RNU6-108P-201ENST00000365558 107 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 SNORD116-8-201ENST00000384365 95 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 MIR1-2-201ENST00000384961 85 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AL357139.1-201ENST00000407792 426 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 RNA5SP100-201ENST00000410903 110 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 RNA5SP59-201ENST00000410922 110 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 RN7SKP142-201ENST00000411236 328 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AL162395.1-201ENST00000457882 422 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AC132942.1-201ENST00000486753 483 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AC096745.1-201ENST00000509945 370 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 MTCO3P28-201ENST00000513351 515 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 RNVU1-2-201ENST00000516326 135 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 RNU6-1178P-201ENST00000516674 107 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AC023050.3-201ENST00000541142 333 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 MIR4775-201ENST00000581168 75 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AC008752.3-201ENST00000588113 712 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AC023043.2-201ENST00000589678 1026 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AC121247.2-201ENST00000604776 136 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 MIR98-201ENST00000606724 119 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AC073114.1-201ENST00000612027 490 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
KLHL28Q9NXS3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 MIR424-201ENST00000362227 98 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 RNU6-1097P-201ENST00000363586 107 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 RNU6-457P-201ENST00000363999 107 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 Y_RNA.201-201ENST00000364052 96 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 RNU6-293P-201ENST00000411259 106 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AL596276.1-201ENST00000434465 418 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 RNU7-182P-201ENST00000459009 62 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AC108729.3-201ENST00000513484 108 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AC109479.2-201ENST00000517842 174 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AC087441.2-201ENST00000529141 262 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 MIR3683-201ENST00000580847 82 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 MIR3136-201ENST00000583498 78 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms