Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 SNORA31.16-201ENST00000516773 139 ntBASIC1.31□□□□□ -2.2
CLN6Q9NWW5 HSPE1P4-201ENST00000550617 308 ntBASIC1.31□□□□□ -2.2
CLN6Q9NWW5 MIR5094-201ENST00000578766 85 ntBASIC1.31□□□□□ -2.2
CLN6Q9NWW5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
CLN6Q9NWW5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CLN6Q9NWW5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CLN6Q9NWW5 Y_RNA.67-201ENST00000362870 100 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 Y_RNA.111-201ENST00000363248 100 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 U3.4-201ENST00000363352 213 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 Y_RNA.480-201ENST00000384364 102 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 RNU6-393P-201ENST00000384475 107 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 MTCYBP2-201ENST00000407745 171 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 RN7SKP51-201ENST00000410781 304 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 AL513185.2-201ENST00000425543 193 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.3□□□□□ -2.2
CLN6Q9NWW5 SNRPGP13-201ENST00000442212 177 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.3□□□□□ -2.2
CLN6Q9NWW5 SNRPEP8-201ENST00000442866 260 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 PRPS1P1-201ENST00000445305 876 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.3□□□□□ -2.2
CLN6Q9NWW5 AL031274.1-201ENST00000450334 232 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.3□□□□□ -2.2
CLN6Q9NWW5 snoU13.9-201ENST00000458927 103 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 LRRC34P2-201ENST00000514850 553 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 AP001372.4-201ENST00000524889 472 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.3□□□□□ -2.2
CLN6Q9NWW5 MIR3683-201ENST00000580847 82 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 MIR4422-201ENST00000581938 83 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 AC012507.3-201ENST00000603556 477 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CLN6Q9NWW5 uc_338.11-201ENST00000619132 160 ntBASIC1.3□□□□□ -2.2
CLN6Q9NWW5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 RNU6-414P-201ENST00000363705 104 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 RNU6-434P-201ENST00000384376 107 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 RNU1-78P-201ENST00000391248 165 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 MIR1323-201ENST00000408090 73 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 RN7SKP61-201ENST00000410642 295 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 RPL21P111-201ENST00000418453 477 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AC139712.2-201ENST00000424302 339 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AC078809.1-201ENST00000427601 140 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AL354695.1-201ENST00000427935 228 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.29□□□□□ -2.2
CLN6Q9NWW5 MTCO1P44-201ENST00000441935 243 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 MTND1P18-201ENST00000448191 573 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AC087477.1-201ENST00000465747 340 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AK3P2-201ENST00000507976 429 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AC097473.1-201ENST00000508142 408 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.29□□□□□ -2.2
CLN6Q9NWW5 RNU1-41P-201ENST00000516161 162 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 RNU1-48P-201ENST00000516400 162 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 RNU6-295P-201ENST00000516901 104 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 SUMO2P18-201ENST00000518873 252 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.29□□□□□ -2.2
CLN6Q9NWW5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.29□□□□□ -2.2
CLN6Q9NWW5 SNORD53B-201ENST00000577887 78 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 MIR3923-201ENST00000579521 83 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AC011494.1-201ENST00000596454 237 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 VN1R107P-201ENST00000601784 209 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AC245014.2-201ENST00000603689 287 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AC246785.4-201ENST00000605374 287 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 AC022513.1-201ENST00000624512 117 ntBASIC1.29□□□□□ -2.2
CLN6Q9NWW5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AC092268.1-201ENST00000342691 405 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 RNU6-112P-201ENST00000363599 104 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 U3.9-201ENST00000363823 204 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 RNU4-48P-201ENST00000365559 182 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 SNORD70.1-201ENST00000391007 85 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AL117339.3-201ENST00000418733 162 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 CYCSP46-201ENST00000423569 204 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLN6Q9NWW5 MTCO3P46-201ENST00000425787 232 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AL022238.1-201ENST00000442557 355 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AC013470.1-201ENST00000453438 462 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AC022364.2-201ENST00000457963 554 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 RPL31P3-201ENST00000458430 332 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 MTCO2P6-201ENST00000463134 685 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AC079382.1-201ENST00000493346 557 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.28□□□□□ -2.2
CLN6Q9NWW5 MTCYBP35-201ENST00000503630 1137 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 HMGN1P13-201ENST00000505795 138 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AC079140.5-201ENST00000507882 310 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 SNORA18.6-201ENST00000516792 115 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AC109446.2-201ENST00000567872 497 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 MIR4703-201ENST00000577728 79 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AP001485.1-201ENST00000604799 199 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 AL356157.2-201ENST00000605122 111 ntBASIC1.28□□□□□ -2.2
CLN6Q9NWW5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 MTND4P14-201ENST00000435799 1354 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 U8.1-201ENST00000362843 134 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 SNORD32A-201ENST00000364805 84 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms