Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC025423.5-201ENST00000550230 219 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AC233702.2-202ENST00000562547 291 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AC100830.2-201ENST00000581636 240 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 RNU6-89P-201ENST00000606519 100 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AC063943.3-201ENST00000615562 356 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 IGHVIII-44-202ENST00000636235 289 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 Y_RNA.9-201ENST00000362354 101 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 RNU4-15P-201ENST00000362613 141 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 SNORD73A-201ENST00000386062 65 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 AL355497.1-201ENST00000406262 551 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 MTCYBP2-201ENST00000407745 171 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 RNU6-908P-201ENST00000410160 94 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 EIF1AXP1-201ENST00000419267 435 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 UBE2V1P4-201ENST00000425374 344 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 GPM6BP3-201ENST00000442797 145 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 AC008628.2-201ENST00000502605 298 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 Y_RNA.704-201ENST00000516851 102 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 AP005597.4-201ENST00000526762 229 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 AC064807.4-201ENST00000607201 407 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 AL121757.2-201ENST00000611223 313 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 MIR6895-201ENST00000613497 78 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 MTND4P23-201ENST00000447723 1363 ntBASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.47□□□□□ -2.01
BLOC1S4Q9NUP1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 AC233981.2-201ENST00000611524 1614 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-227P-201ENST00000362865 103 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 Y_RNA.402-201ENST00000383972 102 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 Y_RNA.504-201ENST00000384481 104 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 MTND1P34-201ENST00000438556 671 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 PRELID3BP1-201ENST00000457142 540 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 AC055731.1-201ENST00000474387 401 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 AC104435.1-201ENST00000483483 166 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 AC104564.1-201ENST00000493028 407 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 TRBVA-201ENST00000498804 316 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-612P-201ENST00000516909 102 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 AC121758.2-201ENST00000553271 193 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 MIR5002-201ENST00000584713 97 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 U4.5-201ENST00000617137 123 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 AC008555.8-201ENST00000623602 2168 ntBASIC2.46□□□□□ -2.02
BLOC1S4Q9NUP1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 Y_RNA.41-201ENST00000362646 102 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 RNY3P3-201ENST00000363816 102 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 SNORD32B-201ENST00000364460 84 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-128P-201ENST00000383976 107 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 SNORD116-4-201ENST00000384733 96 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-780P-201ENST00000391030 104 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 AL357139.1-201ENST00000407792 426 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 SNRPEP10-201ENST00000420249 274 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 MRPS10P2-201ENST00000431226 381 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 PTP4A1P4-201ENST00000512479 322 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-965P-201ENST00000516721 96 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 AC010525.2-201ENST00000590920 195 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 AC009541.1-201ENST00000438279 2662 ntBASIC2.45□□□□□ -2.02
BLOC1S4Q9NUP1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-522P-201ENST00000364497 107 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 Y_RNA.573-201ENST00000384763 105 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 SNORA46.1-201ENST00000391069 153 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-373P-201ENST00000411247 98 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 MTCO1P20-201ENST00000425366 358 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 NDUFA5P4-201ENST00000436704 385 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 SNORA59A-201ENST00000459326 152 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 RPL9P9-202ENST00000466501 579 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms