Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNU1-91P-201ENST00000364746 163 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 RNU6-843P-201ENST00000384454 104 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 RPS29P13-201ENST00000402041 169 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 MIR1289-2-201ENST00000408360 111 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 MIR548K-201ENST00000408406 116 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 RNU6-1245P-201ENST00000411130 106 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 AC074085.1-201ENST00000413598 418 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.73□□□□□ -1.97
DDX4Q9NQI0 AL591043.1-201ENST00000432461 424 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX4Q9NQI0 U8.21-201ENST00000459536 136 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 FGF7P4-201ENST00000509595 295 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 SMURF2P1-201ENST00000514992 481 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 AC105029.1-201ENST00000520250 669 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 AC104576.1-201ENST00000524225 88 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX4Q9NQI0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 AL121917.1-203ENST00000605534 577 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 uc_338.14-201ENST00000613162 166 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.73□□□□□ -1.97
DDX4Q9NQI0 AC244517.12-201ENST00000623581 663 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 AL133216.2-202ENST00000634512 349 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 MIR7515-201ENST00000637837 67 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
DDX4Q9NQI0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX4Q9NQI0 SNORA38-201ENST00000363946 132 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 RNU6-593P-201ENST00000364716 112 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX4Q9NQI0 RNU6-933P-201ENST00000384424 107 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 RNU6-95P-201ENST00000384697 107 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX4Q9NQI0 GZMAP1-201ENST00000503054 631 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 AC114801.2-201ENST00000503825 781 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX4Q9NQI0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX4Q9NQI0 MTND3P22-201ENST00000510932 243 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX4Q9NQI0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX4Q9NQI0 FGF7P1-201ENST00000582820 288 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 AL158827.2-201ENST00000602494 330 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 AC009314.1-201ENST00000603871 304 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 AC064836.2-201ENST00000609491 462 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX4Q9NQI0 AL691447.3-201ENST00000635020 330 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 AC093010.3-201ENST00000570269 15214 ntBASIC2.72□□□□□ -1.97
DDX4Q9NQI0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.71□□□□□ -1.97
DDX4Q9NQI0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
DDX4Q9NQI0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
DDX4Q9NQI0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
DDX4Q9NQI0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
DDX4Q9NQI0 RNU6-336P-201ENST00000364891 107 ntBASIC2.71□□□□□ -1.98
DDX4Q9NQI0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
DDX4Q9NQI0 RN7SKP158-201ENST00000410453 326 ntBASIC2.71□□□□□ -1.98
DDX4Q9NQI0 AC074117.2-201ENST00000417130 397 ntBASIC2.71□□□□□ -1.98
DDX4Q9NQI0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX4Q9NQI0 SNRPEP8-201ENST00000442866 260 ntBASIC2.71□□□□□ -1.98
DDX4Q9NQI0 Y_RNA.635-201ENST00000459041 101 ntBASIC2.71□□□□□ -1.98
DDX4Q9NQI0 MTND5P5-201ENST00000503764 376 ntBASIC2.71□□□□□ -1.98
DDX4Q9NQI0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX4Q9NQI0 RNU5B-3P-201ENST00000516601 115 ntBASIC2.71□□□□□ -1.98
DDX4Q9NQI0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX4Q9NQI0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX4Q9NQI0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX4Q9NQI0 TRAV32-201ENST00000553993 340 ntBASIC2.71□□□□□ -1.98
DDX4Q9NQI0 AC024581.2-201ENST00000619986 252 ntBASIC2.71□□□□□ -1.98
DDX4Q9NQI0 AC138627.2-201ENST00000624202 601 ntBASIC2.71□□□□□ -1.98
DDX4Q9NQI0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
DDX4Q9NQI0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.7□□□□□ -1.98
DDX4Q9NQI0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
DDX4Q9NQI0 RNU6-428P-201ENST00000362942 107 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 SNORA64-201ENST00000384674 134 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 MIR504-201ENST00000385065 83 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 MIR221-201ENST00000385135 110 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 MIR548F5-201ENST00000408421 86 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 AL030996.1-201ENST00000411430 235 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 RPL37P10-201ENST00000412884 288 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 DAP3P1-201ENST00000441522 278 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.7□□□□□ -1.98
DDX4Q9NQI0 GSTA11P-201ENST00000452866 669 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 RPS27P27-201ENST00000498779 255 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 RNU1-54P-201ENST00000517181 120 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 SCARNA11.3-201ENST00000517276 130 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 SNRPGP18-201ENST00000553000 214 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 AC103996.1-201ENST00000555468 102 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.7□□□□□ -1.98
DDX4Q9NQI0 AC096772.1-201ENST00000609146 564 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 AL132765.2-201ENST00000610812 351 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 AC009233.1-201ENST00000616477 371 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 MTND4P23-201ENST00000447723 1363 ntBASIC2.7□□□□□ -1.98
DDX4Q9NQI0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
DDX4Q9NQI0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
DDX4Q9NQI0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.69□□□□□ -1.98
DDX4Q9NQI0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.69□□□□□ -1.98
DDX4Q9NQI0 SNORA68.1-201ENST00000364537 132 ntBASIC2.69□□□□□ -1.98
DDX4Q9NQI0 Y_RNA.339-201ENST00000365325 102 ntBASIC2.69□□□□□ -1.98
DDX4Q9NQI0 MIR764-201ENST00000390811 85 ntBASIC2.69□□□□□ -1.98
DDX4Q9NQI0 AL023284.1-201ENST00000403956 276 ntBASIC2.69□□□□□ -1.98
DDX4Q9NQI0 RNA5SP390-201ENST00000410191 113 ntBASIC2.69□□□□□ -1.98
DDX4Q9NQI0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms