Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNU6-956P-201ENST00000458868 103 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 ARL2BPP4-201ENST00000506854 471 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 SNORA43.2-201ENST00000516652 128 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 RNA5SP503-201ENST00000517047 117 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 AC006362.1-201ENST00000567392 174 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 AC024614.2-201ENST00000577584 372 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 MIR4255-201ENST00000579351 72 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 AP005136.1-201ENST00000579765 429 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 MIR4781-201ENST00000585250 76 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 MIR502-201ENST00000606349 86 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 AL390237.1-201ENST00000404226 1415 ntBASIC1.74□□□□□ -2.13
TM9SF3Q9HD45 MTND5P17-201ENST00000418405 1603 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 MIR126-201ENST00000362291 85 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 SNORD56.1-201ENST00000362913 68 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 Y_RNA.99-201ENST00000363138 105 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 Y_RNA.159-201ENST00000363674 87 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 RNU6-743P-201ENST00000364151 106 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 RNU6-1164P-201ENST00000364428 107 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 RNU6-45P-201ENST00000384471 107 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 SNORA67.5-201ENST00000391036 107 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 OR9R1P-201ENST00000412200 877 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 RPL30P12-201ENST00000474666 353 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 Y_RNA.673-201ENST00000516306 88 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 RNU6-965P-201ENST00000516721 96 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 RMST_6.1-201ENST00000611980 203 ntBASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.73□□□□□ -2.13
TM9SF3Q9HD45 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 CBX3P1-201ENST00000325243 554 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-37P-201ENST00000362692 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-944P-201ENST00000364023 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-11P-201ENST00000364234 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-25P-201ENST00000383873 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-1-201ENST00000383898 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-48P-201ENST00000384161 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-36P-201ENST00000384172 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-4P-201ENST00000384205 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-5P-201ENST00000384238 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-3P-201ENST00000384314 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-16P-201ENST00000384385 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-15P-201ENST00000384534 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-2-201ENST00000384627 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-29P-201ENST00000384637 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-9-201ENST00000384776 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-33P-201ENST00000384793 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 PIGFP2-201ENST00000421400 651 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 CBX3P6-201ENST00000430257 527 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC132479.1-201ENST00000449160 144 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU7-182P-201ENST00000459009 62 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC010424.1-201ENST00000506336 297 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AP003072.2-201ENST00000527756 676 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AP002963.1-201ENST00000530590 184 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 MIR5692A1-201ENST00000580523 69 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 MIR4303-201ENST00000581299 66 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC008752.3-201ENST00000588113 712 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC010620.1-201ENST00000601088 1102 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC123912.5-201ENST00000605470 343 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC087752.4-201ENST00000605911 462 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 RNU6-6P-201ENST00000606623 107 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC008147.4-201ENST00000617570 1204 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 AC026585.1-201ENST00000619582 524 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 SEPT14P19-203ENST00000633205 211 ntBASIC1.72□□□□□ -2.13
TM9SF3Q9HD45 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 RNU6-78P-201ENST00000362897 107 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 RNU6-1097P-201ENST00000363586 107 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 Y_RNA.553-201ENST00000384670 102 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 RNU6-606P-201ENST00000384721 111 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 RAP1BP3-201ENST00000407180 549 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 AP1B1P2-201ENST00000416196 106 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 Z82205.1-201ENST00000428456 297 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 AL596276.1-201ENST00000434465 418 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 AL360221.1-201ENST00000445989 335 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 PPP1R2P5-201ENST00000457256 603 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 RNU6-970P-201ENST00000516312 107 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 AL391840.1-201ENST00000571144 367 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 MIR4703-201ENST00000577728 79 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 AC008536.2-201ENST00000607284 349 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 RMST_7.1-201ENST00000621935 268 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms