Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MIR2355-201ENST00000517199 87 ntBASIC3.6□□□□□ -1.83
CD248Q9HCU0 CASP1P1-201ENST00000526345 212 ntBASIC3.6□□□□□ -1.83
CD248Q9HCU0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.6□□□□□ -1.83
CD248Q9HCU0 MIR3921-201ENST00000577308 85 ntBASIC3.6□□□□□ -1.83
CD248Q9HCU0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.6□□□□□ -1.83
CD248Q9HCU0 AC011471.1-201ENST00000585766 187 ntBASIC3.6□□□□□ -1.83
CD248Q9HCU0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.6□□□□□ -1.83
CD248Q9HCU0 Z83818.1-201ENST00000603584 150 ntBASIC3.6□□□□□ -1.83
CD248Q9HCU0 MZT1P2-201ENST00000604387 248 ntBASIC3.6□□□□□ -1.83
CD248Q9HCU0 MIR7851-201ENST00000610611 160 ntBASIC3.6□□□□□ -1.83
CD248Q9HCU0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.6□□□□□ -1.83
CD248Q9HCU0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD248Q9HCU0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CD248Q9HCU0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD248Q9HCU0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD248Q9HCU0 AL359854.1-201ENST00000614203 1594 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AP003122.5-201ENST00000527668 3766 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 DEFB108F-201ENST00000344638 222 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 RNU6-384P-201ENST00000364900 104 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 Y_RNA.405-201ENST00000383979 100 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 Y_RNA.451-201ENST00000384200 100 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 Y_RNA.524-201ENST00000384564 100 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 Y_RNA.561-201ENST00000384694 100 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 MIR493-201ENST00000385254 89 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CD248Q9HCU0 AL079342.1-201ENST00000401460 267 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 RNU2-20P-201ENST00000410425 191 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AL513331.1-201ENST00000411908 397 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC006989.1-201ENST00000427212 131 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC084357.1-201ENST00000473404 255 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC025518.1-201ENST00000479856 347 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 SEPT14P8-201ENST00000508026 178 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 RNU2-27P-201ENST00000516185 142 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 SNORA64.4-201ENST00000516632 81 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 RNU6-861P-201ENST00000516745 106 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 RNU6-612P-201ENST00000516909 102 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 Y_RNA.706-201ENST00000516933 99 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 RN7SKP57-201ENST00000517248 293 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC104027.1-201ENST00000521887 300 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.59□□□□□ -1.83
CD248Q9HCU0 MRPS36P4-201ENST00000534436 298 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC103996.1-201ENST00000555468 102 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC104581.2-201ENST00000572227 430 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC005000.2-201ENST00000605468 310 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC004832.4-201ENST00000608952 331 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 AC240442.1-201ENST00000616055 283 ntBASIC3.59□□□□□ -1.83
CD248Q9HCU0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.59□□□□□ -1.83
CD248Q9HCU0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.59□□□□□ -1.83
CD248Q9HCU0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CD248Q9HCU0 HAUS6P2-201ENST00000433254 2404 ntBASIC3.59□□□□□ -1.84
CD248Q9HCU0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CD248Q9HCU0 AC007785.2-201ENST00000598627 1916 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD248Q9HCU0 MIR412-201ENST00000362142 91 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 Y_RNA.76-201ENST00000362931 109 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 SNORD56.3-201ENST00000363507 71 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 U3.6-201ENST00000363622 211 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 RNU6-937P-201ENST00000384325 106 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 AL033519.2-201ENST00000403958 392 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 RN7SKP111-201ENST00000410349 271 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 AL592148.1-201ENST00000413568 445 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.58□□□□□ -1.84
CD248Q9HCU0 CYCSP32-201ENST00000440548 321 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 RPL23AP45-201ENST00000476406 468 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 RPS29P26-201ENST00000477483 171 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 AC093663.1-201ENST00000497190 394 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 AC074198.2-201ENST00000508153 258 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 RNU7-175P-201ENST00000515915 61 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 RNU6-496P-201ENST00000516145 99 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 RNU6-579P-201ENST00000516879 102 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.58□□□□□ -1.84
CD248Q9HCU0 AC004832.5-201ENST00000608677 401 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 AC097372.5-201ENST00000623665 376 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.58□□□□□ -1.84
CD248Q9HCU0 AC021753.1-201ENST00000635724 168 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD248Q9HCU0 AC099654.7-201ENST00000635788 2127 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 AC008568.2-201ENST00000623862 2313 ntBASIC3.58□□□□□ -1.84
CD248Q9HCU0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.57□□□□□ -1.84
CD248Q9HCU0 Y_RNA.170-201ENST00000363746 110 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 RNA5SP42-201ENST00000364278 115 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 RNU6-290P-201ENST00000365212 101 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 CD24P4-201ENST00000382840 243 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 RNU6-1081P-201ENST00000384537 107 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 MIR613-201ENST00000385248 95 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.57□□□□□ -1.84
CD248Q9HCU0 AL451074.5-201ENST00000415894 435 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 AL117339.3-201ENST00000418733 162 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 AC245291.1-201ENST00000419501 328 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 TOMM20P4-201ENST00000427861 435 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 EIF1P2-201ENST00000428233 350 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.57□□□□□ -1.84
CD248Q9HCU0 RN7SL807P-201ENST00000470923 297 ntBASIC3.57□□□□□ -1.84
CD248Q9HCU0 AK3P2-201ENST00000507976 429 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms