Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 AL034555.1-201ENST00000604816 211 ntBASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 AL121655.1-201ENST00000605811 308 ntBASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 MIR92B-201ENST00000607575 96 ntBASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 RMST_8.1-201ENST00000610287 165 ntBASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 AL450472.1-202ENST00000637286 180 ntBASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 MFSD8-233ENST00000641482 4860 ntBASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM39Q9HCM9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 RNU6-222P-201ENST00000362438 107 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 RNU6-655P-201ENST00000362858 107 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 RNU6-238P-201ENST00000363313 106 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 MIR7-3-201ENST00000384898 110 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 MIR186-201ENST00000384988 86 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 RNU6-1109P-201ENST00000391187 107 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 MIR320B2-201ENST00000408479 138 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 AC002075.2-201ENST00000425207 252 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 AC009414.1-201ENST00000427200 443 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 SDAD1P3-201ENST00000427380 333 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 AP000870.1-201ENST00000472927 406 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 RN7SL293P-201ENST00000481765 281 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 RNA5SP112-201ENST00000515937 99 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 RNU5F-2P-201ENST00000516066 82 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 SNORA31.16-201ENST00000516773 139 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 AP002770.2-201ENST00000543613 532 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 MIR4765-201ENST00000585007 77 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 AC019176.2-201ENST00000611579 315 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 MAPK10-322ENST00000641485 4530 ntBASIC3.47□□□□□ -1.85
TRIM39Q9HCM9 AC103988.1-201ENST00000566382 2177 ntBASIC3.46□□□□□ -1.85
TRIM39Q9HCM9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 OR56A5-201ENST00000340110 738 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 RNU6-529P-201ENST00000363383 104 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 RNU6-280P-201ENST00000364145 104 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 U8.10-201ENST00000384260 133 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 Y_RNA.556-201ENST00000384677 113 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 RPL23AP22-201ENST00000437556 453 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 snoU13.6-201ENST00000458785 104 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 COX6CP5-201ENST00000527162 228 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 AL161670.1-201ENST00000554348 137 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 AC004817.2-201ENST00000561794 651 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 AC074050.1-201ENST00000563247 211 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 AL162713.1-201ENST00000604480 262 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 AL137843.1-201ENST00000605078 385 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 AC068647.1-201ENST00000489539 2265 ntBASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM39Q9HCM9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 AL049781.1-201ENST00000623195 3585 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 RNA5SP50-201ENST00000363731 107 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 SNORD115-8-201ENST00000363856 82 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 RNU6-879P-201ENST00000364328 108 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 SNORD115-38-201ENST00000365037 82 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 Y_RNA.452-201ENST00000384202 108 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 SNORD78.2-201ENST00000391076 69 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 MIR208B-201ENST00000401172 77 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 AC097463.2-201ENST00000421074 142 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 Z98742.2-201ENST00000431564 187 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 RPS15AP7-201ENST00000439294 405 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 RAC1P5-201ENST00000512182 576 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 AC026333.2-201ENST00000542164 106 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 AC027288.2-201ENST00000553028 243 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 MIR4425-201ENST00000580572 84 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 MIR3149-201ENST00000584629 83 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 AC005296.1-201ENST00000616145 209 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 U4.1-201ENST00000620349 87 ntBASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM39Q9HCM9 AC099654.7-201ENST00000635788 2127 ntBASIC3.44□□□□□ -1.86
TRIM39Q9HCM9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM39Q9HCM9 AL356274.2-201ENST00000624379 3752 ntBASIC3.44□□□□□ -1.86
TRIM39Q9HCM9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM39Q9HCM9 RN7SKP111-201ENST00000410349 271 ntBASIC3.44□□□□□ -1.86
TRIM39Q9HCM9 AC017079.2-201ENST00000416102 485 ntBASIC3.44□□□□□ -1.86
TRIM39Q9HCM9 YME1L1P1-201ENST00000429435 297 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms