Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 RNU4-56P-201ENST00000364700 142 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NSUN3Q9H649 Y_RNA.412-201ENST00000384001 104 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 Y_RNA.510-201ENST00000384511 114 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 MIR1289-1-201ENST00000408836 144 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 AC024067.1-201ENST00000426199 223 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 POLR2KP2-201ENST00000438155 177 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.81□□□□□ -1.8
NSUN3Q9H649 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 RPL23AP49-201ENST00000492925 468 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 BTF3L4P4-201ENST00000506381 449 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.81□□□□□ -1.8
NSUN3Q9H649 AC023141.12-201ENST00000512399 199 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 SNORA31.19-201ENST00000517079 126 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 AC008011.1-201ENST00000545989 227 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 MIR3124-201ENST00000582636 67 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 FAM35DP-201ENST00000323387 2712 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NSUN3Q9H649 AC009541.1-201ENST00000438279 2662 ntBASIC3.81□□□□□ -1.8
NSUN3Q9H649 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NSUN3Q9H649 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NSUN3Q9H649 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NSUN3Q9H649 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.81□□□□□ -1.8
NSUN3Q9H649 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.81□□□□□ -1.8
NSUN3Q9H649 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NSUN3Q9H649 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NSUN3Q9H649 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NSUN3Q9H649 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.8□□□□□ -1.8
NSUN3Q9H649 RNU6-105P-201ENST00000363909 104 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 Y_RNA.230-201ENST00000364348 109 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 RNU6-312P-201ENST00000364629 107 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 RNA5SP167-201ENST00000365461 116 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 RNU6-1286P-201ENST00000383871 107 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 RNU6-741P-201ENST00000383889 107 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 RNU6-211P-201ENST00000384047 107 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 MIR10B-201ENST00000385011 110 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 SNORD17-201ENST00000390930 237 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 RNU6-1001P-201ENST00000411265 100 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 AL390729.2-201ENST00000416137 156 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 AL353705.4-201ENST00000449661 238 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 AC139453.3-201ENST00000493276 369 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 RNU6-966P-201ENST00000516479 104 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 AC090877.1-201ENST00000561418 344 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 Y_RNA.778-201ENST00000620203 90 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NSUN3Q9H649 AL109809.4-201ENST00000603520 2185 ntBASIC3.8□□□□□ -1.8
NSUN3Q9H649 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NSUN3Q9H649 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NSUN3Q9H649 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.8□□□□□ -1.8
NSUN3Q9H649 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NSUN3Q9H649 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NSUN3Q9H649 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NSUN3Q9H649 Y_RNA.23-201ENST00000362496 106 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 Y_RNA.127-201ENST00000363386 109 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 Y_RNA.331-201ENST00000365267 102 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 RNU6-281P-201ENST00000384212 103 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 MIR329-1-201ENST00000385028 80 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 MIR34A-201ENST00000385130 110 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 MIR153-2-201ENST00000385225 87 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NSUN3Q9H649 RNU6-837P-201ENST00000391056 108 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 DBIP2-201ENST00000419076 262 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 SEPT7P4-201ENST00000437076 306 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 Z82210.1-201ENST00000440037 231 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.79□□□□□ -1.8
NSUN3Q9H649 AC092798.1-201ENST00000458542 409 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 snoU109.2-201ENST00000459316 135 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 PHBP14-201ENST00000512887 367 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.79□□□□□ -1.8
NSUN3Q9H649 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.79□□□□□ -1.8
NSUN3Q9H649 EIF4BP1-201ENST00000554881 351 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 AL391261.3-201ENST00000557194 520 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 AC055872.1-201ENST00000570978 278 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 AC020914.4-201ENST00000597690 277 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.79□□□□□ -1.8
NSUN3Q9H649 snoU18.1-201ENST00000629629 71 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.79□□□□□ -1.8
NSUN3Q9H649 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NSUN3Q9H649 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.79□□□□□ -1.8
NSUN3Q9H649 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NSUN3Q9H649 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NSUN3Q9H649 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
NSUN3Q9H649 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NSUN3Q9H649 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NSUN3Q9H649 Y_RNA.75-201ENST00000362927 97 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 RNA5SP374-201ENST00000362939 125 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 RNU6-1074P-201ENST00000383995 104 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 RNU6-1145P-201ENST00000384246 107 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 U8.10-201ENST00000384260 133 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 MIR3074-201ENST00000384885 81 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.78□□□□□ -1.8
NSUN3Q9H649 HMGN2P21-201ENST00000447764 270 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.78□□□□□ -1.8
NSUN3Q9H649 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.78□□□□□ -1.8
NSUN3Q9H649 AP000873.1-201ENST00000463987 400 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 RPS20P22-201ENST00000473700 357 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 AC093663.1-201ENST00000497190 394 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 AC005840.1-201ENST00000498412 377 ntBASIC3.78□□□□□ -1.8
NSUN3Q9H649 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms