Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SNORD116-5-201ENST00000384462 95 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 Y_RNA.582-201ENST00000391023 95 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AC245102.2-201ENST00000448956 180 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 RPL9P6-201ENST00000492764 598 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AK3P2-201ENST00000507976 429 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 RNU1-41P-201ENST00000516161 162 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 RNU1-48P-201ENST00000516400 162 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AC090115.3-201ENST00000553218 849 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 MIR3136-201ENST00000583498 78 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AC012507.3-201ENST00000603556 477 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AL627230.6-201ENST00000611129 280 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AP000560.1-201ENST00000624150 1937 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 AC008555.8-201ENST00000623602 2168 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
DDX47Q9H0S4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
DDX47Q9H0S4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 SNORA12-201ENST00000391162 147 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 RN7SKP284-201ENST00000411002 343 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 VN1R108P-201ENST00000431580 830 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 HMGN2P3-201ENST00000433603 273 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 AL606489.2-201ENST00000433886 234 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 AC244670.1-201ENST00000436879 112 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 HMGN2P5-201ENST00000436882 273 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.94□□□□□ -2.1
DDX47Q9H0S4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.94□□□□□ -2.1
DDX47Q9H0S4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.94□□□□□ -2.1
DDX47Q9H0S4 AC145146.1-201ENST00000496370 254 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 AC093259.1-201ENST00000509755 300 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 SNORA31.16-201ENST00000516773 139 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 RNU2-44P-201ENST00000516795 194 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.94□□□□□ -2.1
DDX47Q9H0S4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.94□□□□□ -2.1
DDX47Q9H0S4 TRAV32-201ENST00000553993 340 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.94□□□□□ -2.1
DDX47Q9H0S4 MIR4299-201ENST00000577899 72 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 MIR4424-201ENST00000585257 86 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 RNU6-85P-201ENST00000605989 107 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 HULC.1-201ENST00000612720 240 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 AC091932.3-201ENST00000624223 323 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
DDX47Q9H0S4 SNORD32B-201ENST00000364460 84 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 Y_RNA.255-201ENST00000364581 97 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 RNU6-142P-201ENST00000384019 107 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 RNU6-1119P-201ENST00000384349 108 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 RNA5SP465-201ENST00000391195 109 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 RNU4-55P-201ENST00000410731 137 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AL158823.1-201ENST00000418441 478 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AL590135.1-201ENST00000422215 156 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 OOSP1P1-201ENST00000423265 274 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AC019205.3-201ENST00000424573 156 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 MTND2P29-201ENST00000438595 412 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AC016700.2-201ENST00000446011 156 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 MTCO2P18-201ENST00000457151 658 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AC015911.1-201ENST00000495111 156 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 RNU6-991P-201ENST00000516168 107 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 SNORA40.12-201ENST00000516329 111 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 MTND4P7-201ENST00000523876 130 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AP005136.1-201ENST00000579765 429 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 MIR3611-201ENST00000584484 83 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 AP006437.1-201ENST00000641440 3685 ntBASIC1.93□□□□□ -2.1
DDX47Q9H0S4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.93□□□□□ -2.1
DDX47Q9H0S4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
DDX47Q9H0S4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
DDX47Q9H0S4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
DDX47Q9H0S4 MIR597-201ENST00000384968 97 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 AL606923.1-201ENST00000406616 190 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 MIR1294-201ENST00000408503 142 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 RN7SKP61-201ENST00000410642 295 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.92□□□□□ -2.1
DDX47Q9H0S4 RPL23AP95-201ENST00000426806 265 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 PPP1R2P5-201ENST00000457256 603 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 RPS29P21-201ENST00000496272 170 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms