Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 Y_RNA.122-201ENST00000363331 96 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 SNORD115-8-201ENST00000363856 82 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 RNU6-1141P-201ENST00000364520 107 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 Y_RNA.275-201ENST00000364726 110 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 SNORD115-38-201ENST00000365037 82 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 SNORA5A-201ENST00000384111 134 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 RNU6-1145P-201ENST00000384246 107 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 RNU6-21P-201ENST00000384710 107 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 Y_RNA.570-201ENST00000384750 101 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 MIR329-1-201ENST00000385028 80 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 FTH1P15-201ENST00000406984 280 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 RNU6-1001P-201ENST00000411265 100 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 NDUFS5P4-201ENST00000412983 318 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 COX6CP10-201ENST00000416832 224 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 MRPL42P6-201ENST00000486397 371 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 RNA5SP468-201ENST00000516782 93 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 RNU7-110P-201ENST00000516891 62 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 RNU6-58P-201ENST00000517143 103 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 AC026403.1-201ENST00000518938 295 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 AC087441.2-201ENST00000529141 262 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 MIR5695-201ENST00000579717 85 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 MIR4282-201ENST00000583613 67 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 AC010620.2-201ENST00000600135 313 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 AL079305.1-201ENST00000623159 3008 ntBASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
FOXP3Q9BZS1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 RNA5SP119-201ENST00000362715 117 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.230-201ENST00000364348 109 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.292-201ENST00000364904 97 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 SNORA3.3-201ENST00000408712 125 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 RN7SKP61-201ENST00000410642 295 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AL390729.2-201ENST00000416137 156 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AC117440.1-201ENST00000474107 571 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 RPS4XP22-201ENST00000480755 780 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 RPS27AP10-201ENST00000496103 208 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AC016632.1-201ENST00000503994 196 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 SNORD116-28-201ENST00000516123 91 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 RNU6-1198P-201ENST00000516904 67 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 SNORA31.23-201ENST00000517219 133 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 HSPE1P4-201ENST00000550617 308 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 UBL5P4-201ENST00000562584 236 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AL138963.2-201ENST00000605137 226 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AC011921.3-201ENST00000605540 361 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AC084757.4-201ENST00000616350 526 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 AL021368.2-201ENST00000606125 5352 ntBASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXP3Q9BZS1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 HAUS6P2-201ENST00000433254 2404 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 AC007656.2-201ENST00000624902 4547 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 UBE2WP1-201ENST00000362030 340 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 SNORA25.1-201ENST00000362326 128 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 RNU6-50P-201ENST00000362356 103 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 RNA5SP295-201ENST00000362655 121 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 RNU6-626P-201ENST00000363354 107 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 RNU6-20P-201ENST00000384106 107 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 RNU6-125P-201ENST00000384505 107 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 MIR544A-201ENST00000384855 91 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 U3.19-201ENST00000390893 196 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 RPL21P17-201ENST00000397467 475 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 AP000567.1-201ENST00000406413 156 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 AL358075.3-201ENST00000426289 226 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 GPM6BP3-201ENST00000442797 145 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 AC006539.3-201ENST00000454258 129 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms