Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RN7SL327P-201ENST00000488659 223 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 AC104984.5-201ENST00000586878 94 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RN7SL853P-201ENST00000617250 223 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 BMS1P21-201ENST00000634565 365 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 MAPK10-349ENST00000641767 3661 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 AP001273.1-201ENST00000624493 3152 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 AC073073.2-201ENST00000609827 2578 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 RNU1-62P-201ENST00000362599 164 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 Y_RNA.220-201ENST00000364244 109 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 RNU1-140P-201ENST00000365040 165 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 Y_RNA.544-201ENST00000384650 113 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 SNORD12C-201ENST00000386307 89 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-383P-201ENST00000410864 94 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 Y_RNA.622-201ENST00000411091 108 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 ABCF2P2-201ENST00000450549 296 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 AC078918.1-201ENST00000498515 228 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 AC105129.1-201ENST00000560250 297 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 RN7SL600P-201ENST00000581811 299 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 AC019159.1-201ENST00000605094 187 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 AL121932.1-201ENST00000605542 214 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 U2.21-201ENST00000637295 81 ntBASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3Q9BZ76 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 AL161912.2-201ENST00000565707 3007 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 AC021146.4-201ENST00000309229 279 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-727P-201ENST00000363592 107 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 Y_RNA.221-201ENST00000364248 96 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 RNA5SP72-201ENST00000364442 117 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 Y_RNA.243-201ENST00000364481 109 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-1141P-201ENST00000364520 107 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 RNU1-73P-201ENST00000383971 164 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 SNORA72-201ENST00000384339 132 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 MIR549A-201ENST00000385268 96 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-855P-201ENST00000410395 104 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 AL645608.4-201ENST00000423619 154 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 NDUFB4P6-201ENST00000436819 366 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 RPL21P10-201ENST00000463521 490 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 AC021231.3-201ENST00000558497 370 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 AC007012.1-201ENST00000567192 175 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 MIR6134-201ENST00000617606 109 ntBASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
CNTNAP3Q9BZ76 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CNTNAP3Q9BZ76 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
CNTNAP3Q9BZ76 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.34□□□□□ -1.72
CNTNAP3Q9BZ76 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.34□□□□□ -1.72
CNTNAP3Q9BZ76 FAM35BP-202ENST00000497389 3337 ntBASIC4.34□□□□□ -1.72
CNTNAP3Q9BZ76 AC063976.2-201ENST00000425667 3556 ntBASIC4.34□□□□□ -1.72
CNTNAP3Q9BZ76 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CNTNAP3Q9BZ76 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 RNU6-778P-201ENST00000363269 103 ntBASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 MIR607-201ENST00000385241 96 ntBASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 AC012306.1-201ENST00000423267 114 ntBASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 AC078809.1-201ENST00000427601 140 ntBASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 AL356535.1-201ENST00000440335 398 ntBASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 AC010469.1-201ENST00000463864 576 ntBASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 IGKV1-22-201ENST00000524313 326 ntBASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms