Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MIR5690-201ENST00000583739 73 ntBASIC3.31□□□□□ -1.88
RTFDC1Q9BY42 AC018462.2-201ENST00000605375 395 ntBASIC3.31□□□□□ -1.88
RTFDC1Q9BY42 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RTFDC1Q9BY42 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTFDC1Q9BY42 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 RNU6-1210P-201ENST00000363775 107 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 SNORD32A-201ENST00000364805 84 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 MIR186-201ENST00000384988 86 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 SNORA3.2-201ENST00000408221 125 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 AC244670.1-201ENST00000436879 112 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 AC146507.2-201ENST00000460608 476 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 AC003982.1-202ENST00000469928 248 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 PTP4A1P4-201ENST00000512479 322 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 RNU6-237P-201ENST00000515985 71 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 HSPE1P4-201ENST00000550617 308 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 AC007375.1-201ENST00000554513 578 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 AC021231.3-201ENST00000558497 370 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 AC069294.1-201ENST00000608397 350 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 CTSLP2-204ENST00000629029 392 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 AC093831.2-201ENST00000624393 3427 ntBASIC3.3□□□□□ -1.88
RTFDC1Q9BY42 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 MIR26A1-201ENST00000362205 77 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 Y_RNA.474-201ENST00000384341 102 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 Y_RNA.529-201ENST00000384586 119 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 RNU6-306P-201ENST00000384617 107 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 RPS15AP7-201ENST00000439294 405 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 RPL21P2-201ENST00000440049 481 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 Z96811.1-201ENST00000445880 108 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 RPS29P27-201ENST00000463711 170 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AC104564.1-201ENST00000493028 407 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 RNU6-559P-201ENST00000516151 98 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AC105245.1-201ENST00000581934 244 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 MIR4273-201ENST00000582824 84 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AC005899.2-201ENST00000584353 90 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 ZNF861P-201ENST00000588126 639 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AL670379.2-201ENST00000604983 252 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AC016727.1-205ENST00000605437 569 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AL159153.1-201ENST00000619688 317 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 AC104985.2-201ENST00000620598 500 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 MTND5P19-201ENST00000424872 1794 ntBASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTFDC1Q9BY42 ZNF658B-202ENST00000615961 3375 ntBASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 RNU6-784P-201ENST00000384330 106 ntBASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 MIR627-201ENST00000384979 97 ntBASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 MTCYBP4-201ENST00000401524 249 ntBASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 MTCO2P27-201ENST00000420740 428 ntBASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 EIF4EP4-201ENST00000424916 578 ntBASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 MIR3199-1-201ENST00000582434 88 ntBASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 7SK.7-201ENST00000603504 247 ntBASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 MIR3976-201ENST00000606807 139 ntBASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 AC098657.3-201ENST00000620434 263 ntBASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTFDC1Q9BY42 MTND4P27-201ENST00000450813 1354 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 RNU6-1285P-201ENST00000363480 105 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 U8.9-201ENST00000365667 134 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 SNORA26.7-201ENST00000391288 122 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 RNU6-1050P-201ENST00000410388 107 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 RNA5SP344-201ENST00000411081 104 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 AC104332.2-201ENST00000429959 156 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 RPS29P6-201ENST00000438196 145 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 SNRPGP7-201ENST00000469016 106 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 UBL5P3-201ENST00000475112 231 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 RPL30P1-201ENST00000488676 339 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 AC023141.11-201ENST00000508864 202 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 RNU2-53P-201ENST00000516257 147 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 RNU6-277P-201ENST00000516272 106 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 RAB11AP2-201ENST00000545905 639 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 AC109446.1-201ENST00000566172 220 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 AL355375.2-201ENST00000574825 175 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms