Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL356575.1-201ENST00000603008 283 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 AC019159.1-201ENST00000605094 187 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 AL359198.2-201ENST00000611836 194 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 AC134878.1-201ENST00000619901 243 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 AL133383.2-201ENST00000622958 2336 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 ABCC13-202ENST00000463099 3842 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 Y_RNA.243-201ENST00000364481 109 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 RNU6-309P-201ENST00000364573 106 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 RNY1P7-201ENST00000384743 110 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 SNORA26.3-201ENST00000391119 136 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 MIR1302-5-201ENST00000408164 150 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 MIR1261-201ENST00000408659 82 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 MIR1278-201ENST00000408753 81 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 RNA5SP120-201ENST00000410900 112 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 RNA5SP497-201ENST00000516081 97 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 LINC00933-203ENST00000559812 219 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 AL450326.2-201ENST00000421913 1962 ntBASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL25A1Q9BXS0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 ZNF720P1-201ENST00000562403 1939 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 AL450345.1-202ENST00000605741 3881 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 Y_RNA.415-201ENST00000384012 112 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 SNORA18.3-201ENST00000384122 132 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 SNORA72-201ENST00000384339 132 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 RNU6-178P-201ENST00000384631 104 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 RNU6-440P-201ENST00000390882 105 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 COTL1P1-201ENST00000422309 375 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 AC006517.1-201ENST00000480485 328 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 RNU6-1146P-201ENST00000516282 102 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 RNA5SP73-201ENST00000516744 108 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 RNU6-1183P-201ENST00000517054 60 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 MIR3936-201ENST00000584304 110 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 AC020895.1-201ENST00000595362 272 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 AC025946.2-201ENST00000603398 234 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 MIR6133-201ENST00000617057 108 ntBASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
COL25A1Q9BXS0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 SNORA38.1-201ENST00000364172 131 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 RNA5SP175-201ENST00000364275 119 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 SNORD18B-201ENST00000365659 72 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 SNORA70.6-201ENST00000383934 134 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 SNORA70E-201ENST00000384492 135 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 MIR490-201ENST00000384865 128 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 SNORD12C-201ENST00000386307 89 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 AC244670.1-201ENST00000436879 112 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 RPS4XP2-201ENST00000458402 793 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 RNA5SP246-201ENST00000458909 119 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 RPL21P10-201ENST00000463521 490 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 RNU6-107P-201ENST00000516643 102 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 RNU6-703P-201ENST00000516946 107 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 AC007012.1-201ENST00000567192 175 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 AC087499.8-201ENST00000578406 226 ntBASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.3□□□□□ -1.72
COL25A1Q9BXS0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 RNU6-173P-201ENST00000364215 104 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms