Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.12□□□□□ -2.23
VAT1Q99536 AC116562.3-201ENST00000506136 177 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 ATP5EP1-201ENST00000510257 156 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 SNORA3.4-201ENST00000515969 96 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 Y_RNA.672-201ENST00000516289 104 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 SCARNA24.1-201ENST00000516465 137 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.12□□□□□ -2.23
VAT1Q99536 AP001893.2-201ENST00000526949 202 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 AC068587.5-201ENST00000528506 175 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.12□□□□□ -2.23
VAT1Q99536 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.12□□□□□ -2.23
VAT1Q99536 MIR3136-201ENST00000583498 78 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 MIR8063-201ENST00000621930 81 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 AC099654.13-201ENST00000639774 207 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
VAT1Q99536 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VAT1Q99536 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.12□□□□□ -2.23
VAT1Q99536 ICE2P2-201ENST00000483823 2787 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-500P-201ENST00000362349 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-37P-201ENST00000362692 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-11P-201ENST00000364234 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-25P-201ENST00000383873 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-1-201ENST00000383898 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-116P-201ENST00000384042 109 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-48P-201ENST00000384161 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-36P-201ENST00000384172 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-4P-201ENST00000384205 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-5P-201ENST00000384238 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-43P-201ENST00000384302 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-3P-201ENST00000384314 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-16P-201ENST00000384385 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-692P-201ENST00000384496 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-15P-201ENST00000384534 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-2-201ENST00000384627 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-29P-201ENST00000384637 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-9-201ENST00000384776 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-33P-201ENST00000384793 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-360P-201ENST00000390944 104 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 MTCYBP2-201ENST00000407745 171 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-293P-201ENST00000411259 106 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 OR6C66P-201ENST00000414917 930 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.11□□□□□ -2.23
VAT1Q99536 RPS27P16-201ENST00000425758 201 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 AL135790.2-201ENST00000437701 267 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.11□□□□□ -2.23
VAT1Q99536 HSPE1P9-201ENST00000440046 311 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.11□□□□□ -2.23
VAT1Q99536 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.11□□□□□ -2.23
VAT1Q99536 AC079448.1-201ENST00000449377 373 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 SNRPGP7-201ENST00000469016 106 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 AC108078.1-201ENST00000508073 725 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.11□□□□□ -2.23
VAT1Q99536 MTATP6P9-201ENST00000515039 680 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-377P-201ENST00000515965 102 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.11□□□□□ -2.23
VAT1Q99536 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.11□□□□□ -2.23
VAT1Q99536 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.11□□□□□ -2.23
VAT1Q99536 AC109446.1-201ENST00000566172 220 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 RNU6-6P-201ENST00000606623 107 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 TUSC7.1-201ENST00000610969 165 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
VAT1Q99536 AC009159.2-201ENST00000617603 606 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 AC022306.3-201ENST00000619930 550 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 AL121890.5-201ENST00000620848 304 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 AC095038.3-201ENST00000634439 195 ntBASIC1.11□□□□□ -2.23
VAT1Q99536 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VAT1Q99536 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.1□□□□□ -2.23
VAT1Q99536 RNY1P12-201ENST00000364251 105 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 Y_RNA.324-201ENST00000365165 102 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 RNU6-169P-201ENST00000365336 107 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 RNU5E-5P-201ENST00000365379 116 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 SNORA20.2-201ENST00000383922 131 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 SNORA12.2-201ENST00000391040 156 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.1□□□□□ -2.23
VAT1Q99536 AL356583.2-201ENST00000426536 280 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 AC010975.2-201ENST00000427781 588 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.1□□□□□ -2.23
VAT1Q99536 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.1□□□□□ -2.23
VAT1Q99536 AC244670.1-201ENST00000436879 112 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 AC027119.1-201ENST00000440877 241 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.1□□□□□ -2.23
VAT1Q99536 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.1□□□□□ -2.23
VAT1Q99536 MTCO3P28-201ENST00000513351 515 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 RNA5SP458-201ENST00000516188 119 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 RNU6-311P-201ENST00000516224 102 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 SNORA31.16-201ENST00000516773 139 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.1□□□□□ -2.23
VAT1Q99536 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.1□□□□□ -2.23
VAT1Q99536 AC022878.1-201ENST00000530684 149 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
VAT1Q99536 HMGB1P33-201ENST00000563485 527 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.1□□□□□ -2.23
VAT1Q99536 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.1□□□□□ -2.23
VAT1Q99536 MIR4769-201ENST00000584126 77 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 AC005771.1-201ENST00000585581 349 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 AC008751.2-201ENST00000597885 980 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 AC012507.3-201ENST00000603556 477 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms