Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 AL008636.1-201ENST00000625038 1018 ntBASIC2.54□□□□□ -2
SMC6Q96SB8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.54□□□□□ -2
SMC6Q96SB8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.54□□□□□ -2
SMC6Q96SB8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMC6Q96SB8 Y_RNA.184-201ENST00000363884 108 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 SNORD32A-201ENST00000364805 84 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMC6Q96SB8 AL356057.3-201ENST00000402607 340 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 AL356432.1-201ENST00000405809 419 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 RN7SKP158-201ENST00000410453 326 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 RNU2-23P-201ENST00000410545 195 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.53□□□□□ -2
SMC6Q96SB8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.53□□□□□ -2
SMC6Q96SB8 AL591043.1-201ENST00000432461 424 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.53□□□□□ -2
SMC6Q96SB8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.53□□□□□ -2
SMC6Q96SB8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.53□□□□□ -2
SMC6Q96SB8 SNORD109B-201ENST00000458961 67 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 SNORD109A-201ENST00000459128 67 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 AC130509.1-201ENST00000464158 433 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 RNA5SP112-201ENST00000515937 99 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 SCARNA3-201ENST00000517097 143 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 AC104576.1-201ENST00000524225 88 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 AC010186.2-204ENST00000537668 439 ntBASIC2.53□□□□□ -2
SMC6Q96SB8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.53□□□□□ -2
SMC6Q96SB8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SMC6Q96SB8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
SMC6Q96SB8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMC6Q96SB8 AC002543.1-201ENST00000299783 1954 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 MTND4P27-201ENST00000450813 1354 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SMC6Q96SB8 RNU6-1106P-201ENST00000390845 107 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 RNU6-220P-201ENST00000390919 107 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 RNU6-293P-201ENST00000411259 106 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.52□□□□□ -2.01
SMC6Q96SB8 BX276092.3-201ENST00000424182 230 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AL590632.1-201ENST00000424289 371 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.52□□□□□ -2.01
SMC6Q96SB8 AC011753.1-201ENST00000451001 220 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.52□□□□□ -2.01
SMC6Q96SB8 PPP1R2P5-201ENST00000457256 603 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 RNU7-187P-201ENST00000458985 68 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AC140059.1-201ENST00000489238 361 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 RPL22P13-201ENST00000493291 347 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AK3P2-201ENST00000507976 429 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 HMGB3P3-201ENST00000510526 400 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 PTP4A1P4-201ENST00000512479 322 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 RPL39P5-202ENST00000512505 151 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.52□□□□□ -2.01
SMC6Q96SB8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.52□□□□□ -2.01
SMC6Q96SB8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.52□□□□□ -2.01
SMC6Q96SB8 AC079600.2-201ENST00000550076 130 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.52□□□□□ -2.01
SMC6Q96SB8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AC091135.1-201ENST00000585943 307 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AL356280.1-201ENST00000603614 379 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AP001836.1-201ENST00000604675 523 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 uc_338.15-201ENST00000615470 191 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AC104260.1-201ENST00000616660 539 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 MIR7157-201ENST00000635801 60 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 AC241585.2-209ENST00000638217 143 ntBASIC2.52□□□□□ -2.01
SMC6Q96SB8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMC6Q96SB8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMC6Q96SB8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.51□□□□□ -2.01
SMC6Q96SB8 SNORD62.1-201ENST00000362541 86 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 RNU6-859P-201ENST00000362728 107 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 SNORD114-19-201ENST00000363072 75 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 RNU6-486P-201ENST00000363116 107 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 RNU6-529P-201ENST00000363383 104 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 RNU6-1285P-201ENST00000363480 105 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 RNU6-1222P-201ENST00000384615 107 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 MIR196B-201ENST00000384852 84 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 Y_RNA.604-201ENST00000410574 102 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 RNU2-41P-201ENST00000410991 178 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 AL139396.1-201ENST00000421137 167 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.51□□□□□ -2.01
SMC6Q96SB8 AL109933.2-201ENST00000452651 260 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 AC103851.1-201ENST00000506833 274 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.51□□□□□ -2.01
SMC6Q96SB8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.51□□□□□ -2.01
SMC6Q96SB8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.51□□□□□ -2.01
SMC6Q96SB8 AC121758.2-201ENST00000553271 193 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 AC078795.3-201ENST00000602913 472 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 AC098657.3-201ENST00000620434 263 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.51□□□□□ -2.01
SMC6Q96SB8 TPTEP1-208ENST00000636884 213 ntBASIC2.51□□□□□ -2.01
SMC6Q96SB8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMC6Q96SB8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SMC6Q96SB8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMC6Q96SB8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMC6Q96SB8 AP000560.1-201ENST00000624150 1937 ntBASIC2.5□□□□□ -2.01
SMC6Q96SB8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMC6Q96SB8 MIR449A-201ENST00000362113 91 ntBASIC2.5□□□□□ -2.01
SMC6Q96SB8 Y_RNA.142-201ENST00000363491 102 ntBASIC2.5□□□□□ -2.01
SMC6Q96SB8 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
SMC6Q96SB8 Y_RNA.263-201ENST00000364659 114 ntBASIC2.5□□□□□ -2.01
SMC6Q96SB8 RNU6-593P-201ENST00000364716 112 ntBASIC2.5□□□□□ -2.01
SMC6Q96SB8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMC6Q96SB8 Y_RNA.474-201ENST00000384341 102 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms