Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 snoU13.27-201ENST00000459278 104 ntBASIC0.2□□□□□ -2.38
IFT140Q96RY7 MTND1P3-201ENST00000484956 952 ntBASIC0.2□□□□□ -2.38
IFT140Q96RY7 AC009646.1-201ENST00000510455 318 ntBASIC0.2□□□□□ -2.38
IFT140Q96RY7 RNA5SP255-201ENST00000516370 107 ntBASIC0.2□□□□□ -2.38
IFT140Q96RY7 AC009902.1-201ENST00000519351 183 ntBASIC0.2□□□□□ -2.38
IFT140Q96RY7 AC138915.2-201ENST00000569776 97 ntBASIC0.2□□□□□ -2.38
IFT140Q96RY7 AC126365.2-201ENST00000580630 379 ntBASIC0.2□□□□□ -2.38
IFT140Q96RY7 AC009509.4-201ENST00000619202 509 ntBASIC0.2□□□□□ -2.38
IFT140Q96RY7 RNU6-212P-201ENST00000362642 104 ntBASIC0.19□□□□□ -2.38
IFT140Q96RY7 SNORD114-15-201ENST00000364687 72 ntBASIC0.19□□□□□ -2.38
IFT140Q96RY7 RAP1BP3-201ENST00000407180 549 ntBASIC0.19□□□□□ -2.38
IFT140Q96RY7 AC092423.1-201ENST00000430165 186 ntBASIC0.19□□□□□ -2.38
IFT140Q96RY7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.19□□□□□ -2.38
IFT140Q96RY7 AC007000.2-201ENST00000442564 487 ntBASIC0.19□□□□□ -2.38
IFT140Q96RY7 RNU6-758P-201ENST00000516292 89 ntBASIC0.19□□□□□ -2.38
IFT140Q96RY7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.19□□□□□ -2.38
IFT140Q96RY7 AC098483.2-201ENST00000603158 454 ntBASIC0.19□□□□□ -2.38
IFT140Q96RY7 AL357080.1-201ENST00000617394 239 ntBASIC0.19□□□□□ -2.38
IFT140Q96RY7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.19□□□□□ -2.38
IFT140Q96RY7 AC092656.1-203ENST00000624134 423 ntBASIC0.19□□□□□ -2.38
IFT140Q96RY7 MTND4P21-201ENST00000453886 1357 ntBASIC0.18□□□□□ -2.38
IFT140Q96RY7 RNU6-216P-201ENST00000363282 104 ntBASIC0.18□□□□□ -2.38
IFT140Q96RY7 RNU6-1019P-201ENST00000364424 107 ntBASIC0.18□□□□□ -2.38
IFT140Q96RY7 Y_RNA.332-201ENST00000365271 113 ntBASIC0.18□□□□□ -2.38
IFT140Q96RY7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
IFT140Q96RY7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
IFT140Q96RY7 RNA5SP111-201ENST00000411386 101 ntBASIC0.18□□□□□ -2.38
IFT140Q96RY7 RPS15AP10-201ENST00000432472 382 ntBASIC0.18□□□□□ -2.38
IFT140Q96RY7 AL008629.1-201ENST00000438615 184 ntBASIC0.18□□□□□ -2.38
IFT140Q96RY7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.18□□□□□ -2.38
IFT140Q96RY7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.18□□□□□ -2.38
IFT140Q96RY7 SNORA31.19-201ENST00000517079 126 ntBASIC0.18□□□□□ -2.38
IFT140Q96RY7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.18□□□□□ -2.38
IFT140Q96RY7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.18□□□□□ -2.38
IFT140Q96RY7 AP001596.2-201ENST00000608410 312 ntBASIC0.18□□□□□ -2.38
IFT140Q96RY7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
IFT140Q96RY7 RNA5SP331-201ENST00000364986 107 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 RNU6-487P-201ENST00000365430 104 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 RNU6-1176P-201ENST00000390955 107 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 RNU2-23P-201ENST00000410545 195 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.17□□□□□ -2.38
IFT140Q96RY7 MTCO2P12-201ENST00000427426 682 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 snoU13.14-201ENST00000459372 104 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 SNORD60.2-201ENST00000516883 86 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
IFT140Q96RY7 AC023538.1-201ENST00000534576 736 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 MIR4666A-201ENST00000580160 79 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 AL391001.1-201ENST00000602747 715 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 AC105148.1-201ENST00000604961 409 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.17□□□□□ -2.38
IFT140Q96RY7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.17□□□□□ -2.38
IFT140Q96RY7 SNORA63D-201ENST00000364359 132 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 RNU6-343P-201ENST00000364709 104 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 COX6CP10-201ENST00000416832 224 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.16□□□□□ -2.38
IFT140Q96RY7 RAB28P5-201ENST00000427490 651 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AC048334.1-201ENST00000477975 159 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AC098869.1-201ENST00000481627 292 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.16□□□□□ -2.38
IFT140Q96RY7 SNORD79.1-201ENST00000516069 84 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.16□□□□□ -2.38
IFT140Q96RY7 AL442163.3-201ENST00000554110 156 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 RNU6-622P-201ENST00000384272 103 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 RPS3AP36-201ENST00000398190 775 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.16□□□□□ -2.38
IFT140Q96RY7 AC123900.1-201ENST00000420390 96 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AL590556.1-201ENST00000423231 483 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.16□□□□□ -2.38
IFT140Q96RY7 MTCO3P18-201ENST00000440206 761 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.16□□□□□ -2.38
IFT140Q96RY7 GAPDHP17-201ENST00000449858 1001 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.16□□□□□ -2.38
IFT140Q96RY7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.16□□□□□ -2.38
IFT140Q96RY7 MTCO3P7-201ENST00000510008 774 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.16□□□□□ -2.38
IFT140Q96RY7 BNIP3P9-201ENST00000603714 553 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 MIR3976-201ENST00000606807 139 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AL445264.1-201ENST00000621719 171 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 AL356094.1-201ENST00000624663 1212 ntBASIC0.16□□□□□ -2.38
IFT140Q96RY7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
IFT140Q96RY7 MTND4P14-201ENST00000435799 1354 ntBASIC0.15□□□□□ -2.39
IFT140Q96RY7 RNU6-549P-201ENST00000384433 107 ntBASIC0.15□□□□□ -2.39
IFT140Q96RY7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.15□□□□□ -2.39
IFT140Q96RY7 MTND4LP14-201ENST00000429447 288 ntBASIC0.15□□□□□ -2.39
IFT140Q96RY7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.15□□□□□ -2.39
IFT140Q96RY7 MTCYBP1-201ENST00000454315 1119 ntBASIC0.15□□□□□ -2.39
IFT140Q96RY7 AC024589.1-201ENST00000512207 263 ntBASIC0.15□□□□□ -2.39
IFT140Q96RY7 SNORA31.3-201ENST00000516029 96 ntBASIC0.15□□□□□ -2.39
IFT140Q96RY7 AC025678.1-201ENST00000567861 338 ntBASIC0.15□□□□□ -2.39
IFT140Q96RY7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.15□□□□□ -2.39
IFT140Q96RY7 AL357075.2-201ENST00000614906 189 ntBASIC0.15□□□□□ -2.39
IFT140Q96RY7 RNU6-862P-201ENST00000362804 105 ntBASIC0.14□□□□□ -2.39
IFT140Q96RY7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.14□□□□□ -2.39
IFT140Q96RY7 AC016831.2-201ENST00000417179 352 ntBASIC0.14□□□□□ -2.39
IFT140Q96RY7 MTCO3P29-201ENST00000432119 779 ntBASIC0.14□□□□□ -2.39
IFT140Q96RY7 RPEP5-201ENST00000441137 268 ntBASIC0.14□□□□□ -2.39
IFT140Q96RY7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.14□□□□□ -2.39
IFT140Q96RY7 AL606517.1-201ENST00000446914 387 ntBASIC0.14□□□□□ -2.39
IFT140Q96RY7 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.14□□□□□ -2.39
IFT140Q96RY7 MTCYBP33-201ENST00000575007 1130 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms