Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 RNU1-44P-201ENST00000384453 163 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 SNORA70.10-201ENST00000384515 134 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 RNU6-918P-201ENST00000391219 106 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CITED4Q96RK1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 MIR1294-201ENST00000408503 142 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.83□□□□□ -1.8
CITED4Q96RK1 AC091390.1-201ENST00000433904 331 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CITED4Q96RK1 AC097484.1-201ENST00000471148 389 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 RPS29P2-201ENST00000479278 136 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CITED4Q96RK1 MIR4644-201ENST00000579929 84 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 AL008718.3-201ENST00000610217 321 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 AP000346.3-201ENST00000622821 210 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 MIR7515-201ENST00000637837 67 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CITED4Q96RK1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.83□□□□□ -1.8
CITED4Q96RK1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CITED4Q96RK1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CITED4Q96RK1 ZFRP1-201ENST00000457579 2970 ntBASIC3.83□□□□□ -1.8
CITED4Q96RK1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CITED4Q96RK1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CITED4Q96RK1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CITED4Q96RK1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CITED4Q96RK1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.82□□□□□ -1.8
CITED4Q96RK1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CITED4Q96RK1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.82□□□□□ -1.8
CITED4Q96RK1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CITED4Q96RK1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CITED4Q96RK1 MAPK10-263ENST00000641052 4307 ntBASIC3.82□□□□□ -1.8
CITED4Q96RK1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CITED4Q96RK1 SNORD32B-201ENST00000364460 84 ntBASIC3.82□□□□□ -1.8
CITED4Q96RK1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CITED4Q96RK1 RHEBP3-201ENST00000411920 351 ntBASIC3.82□□□□□ -1.8
CITED4Q96RK1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.82□□□□□ -1.8
CITED4Q96RK1 TPT1P12-201ENST00000448968 492 ntBASIC3.82□□□□□ -1.8
CITED4Q96RK1 RNA5SP143-201ENST00000516936 115 ntBASIC3.82□□□□□ -1.8
CITED4Q96RK1 AC091178.1-203ENST00000584586 279 ntBASIC3.82□□□□□ -1.8
CITED4Q96RK1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.82□□□□□ -1.8
CITED4Q96RK1 MIR8058-201ENST00000615737 89 ntBASIC3.82□□□□□ -1.8
CITED4Q96RK1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CITED4Q96RK1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.82□□□□□ -1.8
CITED4Q96RK1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.82□□□□□ -1.8
CITED4Q96RK1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CITED4Q96RK1 RAD17P1-201ENST00000418130 2042 ntBASIC3.82□□□□□ -1.8
CITED4Q96RK1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CITED4Q96RK1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CITED4Q96RK1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CITED4Q96RK1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CITED4Q96RK1 Y_RNA.304-201ENST00000365011 112 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 SNORA67.2-201ENST00000384300 149 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 AC140479.3-201ENST00000418944 1126 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 OOSP1P1-201ENST00000423265 274 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.81□□□□□ -1.8
CITED4Q96RK1 RPL34P20-201ENST00000442771 351 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 RN7SL385P-201ENST00000468873 276 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 RNU6-709P-201ENST00000517257 104 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.81□□□□□ -1.8
CITED4Q96RK1 AC008033.2-201ENST00000542626 177 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.81□□□□□ -1.8
CITED4Q96RK1 MIR4308-201ENST00000580634 81 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 MIR4270-201ENST00000581799 70 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 MIR3133-201ENST00000583157 78 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.81□□□□□ -1.8
CITED4Q96RK1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.81□□□□□ -1.8
CITED4Q96RK1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 AC087385.3-201ENST00000620477 187 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CITED4Q96RK1 AL034408.1-202ENST00000636088 415 ntBASIC3.81□□□□□ -1.8
CITED4Q96RK1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CITED4Q96RK1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.81□□□□□ -1.8
CITED4Q96RK1 MAPK10-372ENST00000641954 3413 ntBASIC3.8□□□□□ -1.8
CITED4Q96RK1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CITED4Q96RK1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.8□□□□□ -1.8
CITED4Q96RK1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CITED4Q96RK1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CITED4Q96RK1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CITED4Q96RK1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CITED4Q96RK1 SNORD115-30-201ENST00000364117 82 ntBASIC3.8□□□□□ -1.8
CITED4Q96RK1 SNORA51.4-201ENST00000364993 124 ntBASIC3.8□□□□□ -1.8
CITED4Q96RK1 SNORA62-201ENST00000365493 153 ntBASIC3.8□□□□□ -1.8
CITED4Q96RK1 AL139281.1-201ENST00000422120 335 ntBASIC3.8□□□□□ -1.8
CITED4Q96RK1 RNU6-255P-201ENST00000516957 105 ntBASIC3.8□□□□□ -1.8
CITED4Q96RK1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CITED4Q96RK1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CITED4Q96RK1 AC023043.3-201ENST00000593113 385 ntBASIC3.8□□□□□ -1.8
CITED4Q96RK1 AC107294.3-201ENST00000609211 526 ntBASIC3.8□□□□□ -1.8
CITED4Q96RK1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.8□□□□□ -1.8
CITED4Q96RK1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CITED4Q96RK1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.8□□□□□ -1.8
CITED4Q96RK1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CITED4Q96RK1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CITED4Q96RK1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CITED4Q96RK1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.79□□□□□ -1.8
CITED4Q96RK1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CITED4Q96RK1 RNU6-746P-201ENST00000384112 109 ntBASIC3.79□□□□□ -1.8
CITED4Q96RK1 RNU6-1274P-201ENST00000384557 107 ntBASIC3.79□□□□□ -1.8
CITED4Q96RK1 MIR586-201ENST00000385035 97 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms