Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
SNX18Q96RF0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SNX18Q96RF0 AC233981.2-201ENST00000611524 1614 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 RNU1-33P-201ENST00000364249 162 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 Y_RNA.380-201ENST00000365663 111 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 RNU6-968P-201ENST00000384076 107 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 Y_RNA.452-201ENST00000384202 108 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 SNORA51.11-201ENST00000384442 131 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 Y_RNA.512-201ENST00000384518 102 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 MIR1252-201ENST00000408861 65 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 Y_RNA.592-201ENST00000410274 109 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 AC007969.2-201ENST00000441891 191 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 RPL39P40-201ENST00000445481 146 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 AL513124.1-201ENST00000450410 614 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 RNU7-87P-201ENST00000459343 62 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 AC097462.2-201ENST00000504623 481 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 RNA5SP76-201ENST00000516277 87 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 SNORA31.23-201ENST00000517219 133 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 RNU6-711P-201ENST00000517255 106 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX18Q96RF0 7SK.7-201ENST00000603504 247 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 AC010205.1-201ENST00000616668 449 ntBASIC2.95□□□□□ -1.94
SNX18Q96RF0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SNX18Q96RF0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNX18Q96RF0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNX18Q96RF0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 Y_RNA.193-201ENST00000363979 102 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 RNU6-843P-201ENST00000384454 104 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 RNU6-19P-201ENST00000384718 107 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 MIR544A-201ENST00000384855 91 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 MIR190B-201ENST00000401119 79 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SNX18Q96RF0 PTGES3P4-201ENST00000426243 356 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 RPL21P40-201ENST00000428586 483 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 AL353705.4-201ENST00000449661 238 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 TOMM22P6-201ENST00000465035 409 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 RNU7-175P-201ENST00000515915 61 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 SNORD19.2-201ENST00000516978 73 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 RN7SKP272-201ENST00000516988 232 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 AC091152.3-201ENST00000604227 325 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 AC073657.2-201ENST00000605661 303 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 AL121655.1-201ENST00000605811 308 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 AL021879.1-201ENST00000611756 288 ntBASIC2.94□□□□□ -1.94
SNX18Q96RF0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SNX18Q96RF0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SNX18Q96RF0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNX18Q96RF0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SNX18Q96RF0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SNX18Q96RF0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNX18Q96RF0 RNU1-70P-201ENST00000362618 164 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 SNORD32A-201ENST00000364805 84 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 Y_RNA.358-201ENST00000365491 99 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 RNU6-708P-201ENST00000384217 107 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 RNU6-1109P-201ENST00000391187 107 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 MTCYBP2-201ENST00000407745 171 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 AL358453.1-201ENST00000422522 250 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.93□□□□□ -1.94
SNX18Q96RF0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX18Q96RF0 AC104332.2-201ENST00000429959 156 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 AC115115.1-201ENST00000449927 248 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 AC107626.1-201ENST00000471084 183 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 RPL30P1-201ENST00000488676 339 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 AC093852.1-201ENST00000503587 266 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 Y_RNA.706-201ENST00000516933 99 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX18Q96RF0 AL161670.1-201ENST00000554348 137 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX18Q96RF0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX18Q96RF0 AC104581.2-201ENST00000572227 430 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 RPL23AP78-201ENST00000599928 470 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 AC100812.1-201ENST00000607622 580 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 U4.1-201ENST00000620349 87 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 MIR3651-201ENST00000630427 90 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 HAUS6P2-201ENST00000433254 2404 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 AC010889.1-201ENST00000566193 2666 ntBASIC2.93□□□□□ -1.94
SNX18Q96RF0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNX18Q96RF0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNX18Q96RF0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SNX18Q96RF0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms