Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SNRPGP20-201ENST00000604477 205 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 AC005520.5-201ENST00000613926 164 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 MIR7702-201ENST00000621931 59 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 MIR3674-201ENST00000636576 68 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
IFT43Q96FT9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
IFT43Q96FT9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
IFT43Q96FT9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
IFT43Q96FT9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
IFT43Q96FT9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
IFT43Q96FT9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
IFT43Q96FT9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
IFT43Q96FT9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
IFT43Q96FT9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
IFT43Q96FT9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
IFT43Q96FT9 RNU4-17P-201ENST00000365598 141 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 Y_RNA.412-201ENST00000384001 104 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 RNU2-2P-201ENST00000410396 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 RNA5SP475-201ENST00000410568 110 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 Y_RNA.629-201ENST00000411368 105 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 CYCSP48-201ENST00000417124 323 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 AC009963.1-201ENST00000417265 157 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 AC006517.1-201ENST00000480485 328 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 RNU1-61P-201ENST00000516107 151 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 RNU2-58P-201ENST00000516403 183 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 AC105137.2-201ENST00000569073 466 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 MIR3923-201ENST00000579521 83 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 MIR3684-201ENST00000579779 74 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 HMGN2P15-201ENST00000585707 270 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 RNU2-4P-201ENST00000606190 192 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.15-201ENST00000611544 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.16-201ENST00000613119 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.12-201ENST00000613778 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.9-201ENST00000615427 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.11-201ENST00000616345 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.2-201ENST00000616535 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.3-201ENST00000617785 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.19-201ENST00000618602 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 RNU2-1-201ENST00000618664 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.6-201ENST00000619225 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.5-201ENST00000619465 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 U2.10-201ENST00000620268 191 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 AC112484.5-201ENST00000624189 228 ntBASIC4.26□□□□□ -1.73
IFT43Q96FT9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
IFT43Q96FT9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
IFT43Q96FT9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
IFT43Q96FT9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.25□□□□□ -1.73
IFT43Q96FT9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
IFT43Q96FT9 RNU6-727P-201ENST00000363592 107 ntBASIC4.25□□□□□ -1.73
IFT43Q96FT9 SNORA18.3-201ENST00000384122 132 ntBASIC4.25□□□□□ -1.73
IFT43Q96FT9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
IFT43Q96FT9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.25□□□□□ -1.73
IFT43Q96FT9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.25□□□□□ -1.73
IFT43Q96FT9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.25□□□□□ -1.73
IFT43Q96FT9 AC099522.1-202ENST00000514718 367 ntBASIC4.25□□□□□ -1.73
IFT43Q96FT9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
IFT43Q96FT9 AL162713.1-201ENST00000604480 262 ntBASIC4.25□□□□□ -1.73
IFT43Q96FT9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.25□□□□□ -1.73
IFT43Q96FT9 AC034229.5-201ENST00000624258 185 ntBASIC4.25□□□□□ -1.73
IFT43Q96FT9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
IFT43Q96FT9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.25□□□□□ -1.73
IFT43Q96FT9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.25□□□□□ -1.73
IFT43Q96FT9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
IFT43Q96FT9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
IFT43Q96FT9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
IFT43Q96FT9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
IFT43Q96FT9 Y_RNA.182-201ENST00000363880 111 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 SNORA1.3-201ENST00000384676 136 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 MIR186-201ENST00000384988 86 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 AL357075.1-201ENST00000404107 726 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 RN7SKP27-201ENST00000410684 333 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.24□□□□□ -1.73
IFT43Q96FT9 SEPT7P4-201ENST00000437076 306 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.24□□□□□ -1.73
IFT43Q96FT9 RNU5F-2P-201ENST00000516066 82 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 SNORD116-25-201ENST00000516517 92 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 AP002001.1-203ENST00000534002 267 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.24□□□□□ -1.73
IFT43Q96FT9 AC009127.3-201ENST00000570531 403 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 MIR4644-201ENST00000579929 84 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 AL365222.1-201ENST00000614661 98 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 Y_RNA.778-201ENST00000620203 90 ntBASIC4.24□□□□□ -1.73
IFT43Q96FT9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
IFT43Q96FT9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
IFT43Q96FT9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.24□□□□□ -1.73
IFT43Q96FT9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
IFT43Q96FT9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
IFT43Q96FT9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
IFT43Q96FT9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms