Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 RNU6-611P-201ENST00000384276 104 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 MIR221-201ENST00000385135 110 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 RNU6-780P-201ENST00000391030 104 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 EDDM3CP-201ENST00000415977 425 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 SNRPEP10-201ENST00000420249 274 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 RPL31P63-201ENST00000422565 375 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 ERLEC1P1-201ENST00000433806 578 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 RNA5SP281-201ENST00000516504 135 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 SNORA31.25-201ENST00000517242 134 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 MTND1P5-201ENST00000517906 940 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 AP005597.4-201ENST00000526762 229 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 AC022616.8-201ENST00000533569 253 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 AC016256.1-201ENST00000547971 354 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 AC103996.1-201ENST00000555468 102 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 AC233702.2-202ENST00000562547 291 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 TPRKBP2-201ENST00000565969 475 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 MIR5692C1-201ENST00000585309 91 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 BNIP3P25-201ENST00000596023 559 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 RNU6-89P-201ENST00000606519 100 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 U4.5-201ENST00000617137 123 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 AL136360.1-201ENST00000503377 1900 ntBASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.65□□□□□ -2.15
RPUSD4Q96CM3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 RNU6-451P-201ENST00000362921 107 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 RNU1-91P-201ENST00000364746 163 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 SNORA40.19-201ENST00000390846 128 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 SNORD37.1-201ENST00000390968 65 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 SUMO2P12-201ENST00000405924 140 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 MTCYBP2-201ENST00000407745 171 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 RNU6-1068P-201ENST00000410958 103 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC009963.1-201ENST00000417265 157 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AL359672.1-201ENST00000442302 409 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 RPL32P28-201ENST00000443577 397 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AL031274.1-201ENST00000450334 232 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 PMCHL2-203ENST00000457791 237 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC055731.1-201ENST00000474387 401 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AK3P2-201ENST00000507976 429 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AP000763.2-201ENST00000540641 163 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 SNRPGP17-201ENST00000603780 214 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AL034555.1-201ENST00000604816 211 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AL670379.2-201ENST00000604983 252 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 AC068137.4-201ENST00000638485 296 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 OR4G1P-203ENST00000641984 1631 ntBASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.64□□□□□ -2.15
RPUSD4Q96CM3 RNY4P14-201ENST00000363656 96 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 SNORD32B-201ENST00000364460 84 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 Y_RNA.256-201ENST00000364594 104 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 Y_RNA.372-201ENST00000365599 102 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 RNU6-546P-201ENST00000383991 107 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 MTCO1P21-201ENST00000416634 589 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 IFNA20P-201ENST00000436840 528 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 AC244670.1-201ENST00000436879 112 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 MTND1P34-201ENST00000438556 671 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 RNU6-1037P-201ENST00000459571 107 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 AC091435.1-201ENST00000505442 584 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 Y_RNA.655-201ENST00000515919 96 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 SNORA19.2-201ENST00000516013 114 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 AC109635.3-201ENST00000529536 185 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 AC027807.1-201ENST00000559921 996 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 AC007229.1-201ENST00000590455 412 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 AL109918.3-201ENST00000603072 338 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 AF250324.2-201ENST00000608299 610 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 FAM157A-202ENST00000615155 405 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 AL450472.1-202ENST00000637286 180 ntBASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RPUSD4Q96CM3 RNU4-15P-201ENST00000362613 141 ntBASIC1.62□□□□□ -2.15
RPUSD4Q96CM3 RNU6-944P-201ENST00000364023 107 ntBASIC1.62□□□□□ -2.15
RPUSD4Q96CM3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms