Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 Y_RNA.670-201ENST00000516255 105 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 APOOP3-201ENST00000536787 586 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 MTCO3P13-201ENST00000577757 781 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 AC011494.1-201ENST00000596454 237 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 AP000654.2-201ENST00000605633 586 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 AC133104.2-201ENST00000615272 193 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 MTND4LP32-201ENST00000636111 270 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 AL669831.3-213ENST00000636676 183 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 AC138915.1-201ENST00000565427 1685 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 RNU1-112P-201ENST00000364401 164 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 RNU6-596P-201ENST00000365395 98 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 RNU6-142P-201ENST00000384019 107 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 MIR186-201ENST00000384988 86 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 MTCYBP4-201ENST00000401524 249 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 AL591034.2-201ENST00000402839 359 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 RNU6-1304P-201ENST00000411374 106 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 RPL23AP95-201ENST00000426806 265 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.653-201ENST00000459091 95 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 RPL7P42-201ENST00000481005 679 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 RPL23AP94-201ENST00000512518 302 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 RNU6-307P-201ENST00000516743 106 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 HSPE1P20-201ENST00000538133 289 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 MIR3199-1-201ENST00000582434 88 ntBASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP4CQ96CF2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.34□□□□□ -1.88
CHMP4CQ96CF2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
CHMP4CQ96CF2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CHMP4CQ96CF2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 RNU4-79P-201ENST00000362764 141 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 RNU6-1188P-201ENST00000363795 107 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 Y_RNA.504-201ENST00000384481 104 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 Y_RNA.510-201ENST00000384511 114 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 AL078595.1-201ENST00000404458 226 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 RN7SKP61-201ENST00000410642 295 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 CYCSP48-201ENST00000417124 323 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 EIF4EP2-201ENST00000422816 654 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 BX276092.3-201ENST00000424182 230 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 AC087499.2-201ENST00000432861 149 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 AC244670.1-201ENST00000436879 112 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 SNORD19B-201ENST00000459623 84 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 AC104564.1-201ENST00000493028 407 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 RNA5SP356-201ENST00000515972 94 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 AC126177.8-201ENST00000618339 1015 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 AC098657.3-201ENST00000620434 263 ntBASIC3.33□□□□□ -1.88
CHMP4CQ96CF2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AL355596.1-201ENST00000565399 3996 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AC092268.1-201ENST00000342691 405 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 RNU6-655P-201ENST00000362858 107 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 RNU6-529P-201ENST00000363383 104 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 MIR181A2-201ENST00000384863 110 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 MIR218-1-201ENST00000384999 110 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 RNY4P36-201ENST00000391116 96 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 USMG5P1-201ENST00000425964 177 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AC105272.1-201ENST00000438604 198 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 RPL30P15-201ENST00000457129 321 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AC091874.1-201ENST00000511402 339 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 RNU6-1213P-201ENST00000517075 94 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 SCARNA3-201ENST00000517097 143 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AC027176.1-201ENST00000560204 514 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 MIR4319-201ENST00000577285 85 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AL159153.1-201ENST00000619688 317 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 MTND5P9-201ENST00000503854 1755 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 AP000560.1-201ENST00000624150 1937 ntBASIC3.32□□□□□ -1.88
CHMP4CQ96CF2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 RNU6-1210P-201ENST00000363775 107 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 RNU6-842P-201ENST00000384269 107 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 RNU6-784P-201ENST00000384330 106 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 Y_RNA.509-201ENST00000384506 99 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 RNU6-174P-201ENST00000410406 106 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 AC078809.1-201ENST00000427601 140 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 MICF-203ENST00000432679 129 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 RPL23AP50-201ENST00000434149 455 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 RPS15AP7-201ENST00000439294 405 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 GPM6BP3-201ENST00000442797 145 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms