Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 EIF1P4-201ENST00000572664 335 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 AC078795.3-201ENST00000602913 472 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 AC005000.2-201ENST00000605468 310 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 MIR1248-201ENST00000629190 106 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VPS33AQ96AX1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS33AQ96AX1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS33AQ96AX1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS33AQ96AX1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS33AQ96AX1 RNU6-227P-201ENST00000362865 103 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 RNA5SP68-201ENST00000363885 119 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 U3.12-201ENST00000364498 214 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 Y_RNA.372-201ENST00000365599 102 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 RNU6-214P-201ENST00000384130 107 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 Y_RNA.504-201ENST00000384481 104 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 RNA5SP465-201ENST00000391195 109 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AL590002.1-201ENST00000406554 418 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 RNA5SP450-201ENST00000411206 102 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 COTL1P1-201ENST00000422309 375 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS33AQ96AX1 GPM6BP3-201ENST00000442797 145 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AC091874.1-201ENST00000511402 339 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 SCOCP1-201ENST00000554676 349 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AC100830.2-201ENST00000581636 240 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 BNIP3P25-201ENST00000596023 559 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AC064836.2-201ENST00000609491 462 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AC068944.2-201ENST00000610373 403 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 MIR7106-201ENST00000612419 65 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 MIR6817-201ENST00000615588 66 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AL136221.1-201ENST00000621449 509 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS33AQ96AX1 AL450472.1-202ENST00000637286 180 ntBASIC2.19□□□□□ -2.06
VPS33AQ96AX1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS33AQ96AX1 Y_RNA.318-201ENST00000365131 97 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 AL357139.1-201ENST00000407792 426 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS33AQ96AX1 AC009963.1-201ENST00000417265 157 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS33AQ96AX1 EIF1AXP1-201ENST00000419267 435 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 UBE2V1P4-201ENST00000425374 344 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 AC018634.1-201ENST00000437554 401 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 AC114801.2-201ENST00000503825 781 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 AC093259.1-201ENST00000509755 300 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 RNA5SP148-201ENST00000516527 94 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 RNU6-314P-201ENST00000516574 104 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS33AQ96AX1 CYP4A27P-201ENST00000567218 190 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 AL078605.1-201ENST00000603529 500 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 Z98751.3-201ENST00000604447 521 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 MIR6766-201ENST00000622641 72 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS33AQ96AX1 SNORA43.4-201ENST00000629559 138 ntBASIC2.18□□□□□ -2.06
VPS33AQ96AX1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS33AQ96AX1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS33AQ96AX1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS33AQ96AX1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 RNY3P3-201ENST00000363816 102 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 RNU6-26P-201ENST00000383985 107 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 SNORA12-201ENST00000391162 147 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AL512604.1-201ENST00000404812 257 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 RNU4-26P-201ENST00000410270 107 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 MTCO1P20-201ENST00000425366 358 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 SRIP2-201ENST00000428470 166 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 MTND2P29-201ENST00000438595 412 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 RPS29P27-201ENST00000463711 170 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AC104564.1-201ENST00000493028 407 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AC234781.5-201ENST00000508429 271 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AC025465.4-201ENST00000513422 638 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 RNU6-720P-201ENST00000516363 108 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AC104576.1-201ENST00000524225 88 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 ZNF519P2-201ENST00000557032 169 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS33AQ96AX1 LARP7P3-201ENST00000579888 337 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AC010525.2-201ENST00000590920 195 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 PCGEM1.1-201ENST00000613431 131 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 AC005520.5-201ENST00000613926 164 ntBASIC2.17□□□□□ -2.06
VPS33AQ96AX1 ZNF658B-202ENST00000615961 3375 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS33AQ96AX1 RNU6-451P-201ENST00000362921 107 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 U3.9-201ENST00000363823 204 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms