Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC023043.2-201ENST00000589678 1026 ntBASIC2.6□□□□□ -1.99
SMARCE1Q969G3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.6□□□□□ -1.99
SMARCE1Q969G3 AC093913.1-201ENST00000614178 329 ntBASIC2.6□□□□□ -1.99
SMARCE1Q969G3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.6□□□□□ -1.99
SMARCE1Q969G3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.6□□□□□ -1.99
SMARCE1Q969G3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SMARCE1Q969G3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.6□□□□□ -1.99
SMARCE1Q969G3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 MT-TL1-201ENST00000386347 75 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 RNU6-1106P-201ENST00000390845 107 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 RNU6-876P-201ENST00000391295 104 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 CYCSP48-201ENST00000417124 323 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 AC003685.2-201ENST00000422795 395 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCE1Q969G3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCE1Q969G3 AC124916.1-201ENST00000444020 547 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 AL353752.1-201ENST00000454946 260 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 RPL9P9-202ENST00000466501 579 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCE1Q969G3 AC234781.5-201ENST00000508429 271 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 AC096745.1-201ENST00000509945 370 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 AC025465.4-201ENST00000513422 638 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCE1Q969G3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCE1Q969G3 CBX3P7-201ENST00000532876 502 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 AC046143.2-201ENST00000609789 160 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 HMGB1P24-202ENST00000615653 685 ntBASIC2.59□□□□□ -1.99
SMARCE1Q969G3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.59□□□□□ -2
SMARCE1Q969G3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMARCE1Q969G3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SMARCE1Q969G3 RNU6-562P-201ENST00000362731 107 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 Y_RNA.160-201ENST00000363677 92 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 Y_RNA.301-201ENST00000364990 103 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 SNORD116-11-201ENST00000383882 92 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 SNORA51.11-201ENST00000384442 131 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.58□□□□□ -2
SMARCE1Q969G3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SMARCE1Q969G3 FGF7P8-201ENST00000402994 292 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 AP000275.1-201ENST00000411943 390 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.58□□□□□ -2
SMARCE1Q969G3 RPL23AP95-201ENST00000426806 265 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 MTND3P9-201ENST00000429526 346 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 IFNA20P-201ENST00000436840 528 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.58□□□□□ -2
SMARCE1Q969G3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.58□□□□□ -2
SMARCE1Q969G3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.58□□□□□ -2
SMARCE1Q969G3 RNU6-329P-201ENST00000459618 107 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 RPL30P1-201ENST00000488676 339 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 AC079804.2-201ENST00000490376 200 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.58□□□□□ -2
SMARCE1Q969G3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.58□□□□□ -2
SMARCE1Q969G3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.58□□□□□ -2
SMARCE1Q969G3 AC026464.5-201ENST00000562497 722 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 MIR4742-201ENST00000581069 85 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.58□□□□□ -2
SMARCE1Q969G3 AC006023.1-201ENST00000603944 259 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 AL138963.2-201ENST00000605137 226 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 MIR6895-201ENST00000613497 78 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 AL133216.2-202ENST00000634512 349 ntBASIC2.58□□□□□ -2
SMARCE1Q969G3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.58□□□□□ -2
SMARCE1Q969G3 RNU6-1141P-201ENST00000364520 107 ntBASIC2.57□□□□□ -2
SMARCE1Q969G3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCE1Q969G3 CBX3P9-201ENST00000402326 552 ntBASIC2.57□□□□□ -2
SMARCE1Q969G3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.57□□□□□ -2
SMARCE1Q969G3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.57□□□□□ -2
SMARCE1Q969G3 RPL31P58-201ENST00000469001 379 ntBASIC2.57□□□□□ -2
SMARCE1Q969G3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.57□□□□□ -2
SMARCE1Q969G3 RNA5SP24-201ENST00000516478 95 ntBASIC2.57□□□□□ -2
SMARCE1Q969G3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.57□□□□□ -2
SMARCE1Q969G3 HSPE1P4-201ENST00000550617 308 ntBASIC2.57□□□□□ -2
SMARCE1Q969G3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.57□□□□□ -2
SMARCE1Q969G3 CPDP1-201ENST00000579660 283 ntBASIC2.57□□□□□ -2
SMARCE1Q969G3 MIR5007-201ENST00000583098 95 ntBASIC2.57□□□□□ -2
SMARCE1Q969G3 MIR6766-201ENST00000622641 72 ntBASIC2.57□□□□□ -2
SMARCE1Q969G3 AC005858.4-201ENST00000623191 700 ntBASIC2.57□□□□□ -2
SMARCE1Q969G3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCE1Q969G3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCE1Q969G3 Z82209.1-201ENST00000422141 2135 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 Y_RNA.72-201ENST00000362894 103 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 Y_RNA.151-201ENST00000363566 112 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 RNU6-525P-201ENST00000363685 104 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 Y_RNA.279-201ENST00000364763 95 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 MTCO3P46-201ENST00000425787 232 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 AC236972.1-201ENST00000433225 199 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 AC244670.1-201ENST00000436879 112 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 AC130509.1-201ENST00000464158 433 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 MTCO1P29-201ENST00000496868 288 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.56□□□□□ -2
SMARCE1Q969G3 PTP4A1P4-201ENST00000512479 322 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 SNORA31.16-201ENST00000516773 139 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.56□□□□□ -2
SMARCE1Q969G3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.56□□□□□ -2
SMARCE1Q969G3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.56□□□□□ -2
SMARCE1Q969G3 AC011712.1-201ENST00000588959 234 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 DUXAP9-208ENST00000622815 614 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 SNORA43.4-201ENST00000629559 138 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms