Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 AC008568.2-201ENST00000623862 2313 ntBASIC4.3□□□□□ -1.72
TNFRSF25Q93038 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TNFRSF25Q93038 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TNFRSF25Q93038 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
TNFRSF25Q93038 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 RNU1-18P-201ENST00000363062 164 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 RNU6-103P-201ENST00000363686 107 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 RNU6-335P-201ENST00000364563 113 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 SNORD37.2-201ENST00000391075 66 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 RNA5SP475-201ENST00000410568 110 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 RN7SKP53-201ENST00000411337 315 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 AC009963.1-201ENST00000417265 157 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 AL591419.1-201ENST00000427423 339 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 NDUFB1P1-201ENST00000435191 180 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 AP000705.1-201ENST00000454567 350 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 AL133162.1-201ENST00000463228 453 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 RPL30P12-201ENST00000474666 353 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 S100A11P1-201ENST00000477525 312 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 RNU4-57P-201ENST00000515980 135 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 RNA5SP164-201ENST00000516533 110 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 RNA5SP143-201ENST00000516936 115 ntBASIC4.29□□□□□ -1.72
TNFRSF25Q93038 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFRSF25Q93038 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 AC118273.1-201ENST00000525324 3006 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 RNU6-1298P-201ENST00000362456 101 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 Y_RNA.337-201ENST00000365312 102 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 RNU6-793P-201ENST00000384233 104 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 RN7SKP61-201ENST00000410642 295 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 ELOCP21-201ENST00000412558 336 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 PTGES3P4-201ENST00000426243 356 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 EEF1B2P7-201ENST00000451177 676 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 MTATP6P7-201ENST00000453315 681 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 snoU13.4-201ENST00000458916 104 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 AC026402.1-201ENST00000513642 170 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 RNA5SP108-201ENST00000605921 117 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 MIR3674-201ENST00000636576 68 ntBASIC4.28□□□□□ -1.72
TNFRSF25Q93038 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFRSF25Q93038 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
TNFRSF25Q93038 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFRSF25Q93038 AC092268.1-201ENST00000342691 405 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 RNU4-10P-201ENST00000364383 140 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 Y_RNA.293-201ENST00000364908 93 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 RNA5SP424-201ENST00000390988 115 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 MIR1193-201ENST00000408109 78 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.27□□□□□ -1.73
TNFRSF25Q93038 RPL21P66-201ENST00000426566 466 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 AC244670.1-201ENST00000436879 112 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 RPL23AP58-201ENST00000440453 469 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TNFRSF25Q93038 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.27□□□□□ -1.73
TNFRSF25Q93038 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFRSF25Q93038 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFRSF25Q93038 MIR5685-201ENST00000579080 79 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 MIR5187-201ENST00000583479 76 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 SNRPGP15-201ENST00000600149 222 ntBASIC4.27□□□□□ -1.73
TNFRSF25Q93038 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFRSF25Q93038 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TNFRSF25Q93038 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFRSF25Q93038 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF25Q93038 RNU6-727P-201ENST00000363592 107 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 Y_RNA.172-201ENST00000363765 102 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 snoU2_19.4-201ENST00000364329 80 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 RNU6-1181P-201ENST00000384191 106 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 MIR549A-201ENST00000385268 96 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 SNORA57.1-201ENST00000391227 145 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 RN7SKP156-201ENST00000410308 342 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 TOMM22P1-201ENST00000418578 312 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 AC012306.1-201ENST00000423267 114 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 AC078809.1-201ENST00000427601 140 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms