Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 Y_RNA.67-201ENST00000362870 100 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 RNU1-72P-201ENST00000362976 153 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 RNU6-1188P-201ENST00000363795 107 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 Y_RNA.259-201ENST00000364619 101 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 RNU6-1286P-201ENST00000383871 107 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 MIR128-1-201ENST00000384921 82 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 AL590004.2-201ENST00000404787 371 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 AL138885.1-201ENST00000405921 675 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 AC096664.2-201ENST00000411843 406 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 AL513124.1-201ENST00000450410 614 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 EEF1B2P7-201ENST00000451177 676 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 AC079354.2-201ENST00000453523 154 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 Y_RNA.632-201ENST00000459189 102 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 RPS27AP9-201ENST00000477681 438 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 CKS1BP2-201ENST00000497342 240 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 RNA5SP341-201ENST00000516261 117 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 RNU6-567P-201ENST00000516746 107 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 MRPS36P4-201ENST00000534436 298 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 APOOP3-201ENST00000536787 586 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 MIR5571-201ENST00000577998 113 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 UBL5P2-201ENST00000583788 219 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 RPL23AP88-201ENST00000605759 454 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 AL359697.1-201ENST00000624879 587 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 MIR6733-201ENST00000635723 61 ntBASIC2.6□□□□□ -1.99
RAB40AQ8WXH6 snoU2_19.1-201ENST00000362361 80 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 SNORA36A-201ENST00000384221 132 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 MTCYBP4-201ENST00000401524 249 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 RNU6-1304P-201ENST00000411374 106 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AL139281.1-201ENST00000422120 335 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AL590556.1-201ENST00000423231 483 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 USMG5P1-201ENST00000425964 177 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AC236972.2-201ENST00000434979 310 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 RPL39P40-201ENST00000445481 146 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AL353705.4-201ENST00000449661 238 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 RPS3P1-201ENST00000456781 192 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 S100A11P2-201ENST00000467589 312 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AC005741.1-201ENST00000511094 432 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 RNU6-307P-201ENST00000516743 106 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 RNU6-1213P-201ENST00000517075 94 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AL713866.2-201ENST00000603579 219 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 Z98751.3-201ENST00000604447 521 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AC090115.4-201ENST00000609970 188 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 MIR5739-201ENST00000619803 80 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 MTND4LP32-201ENST00000636111 270 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 AL450472.1-202ENST00000637286 180 ntBASIC2.59□□□□□ -1.99
RAB40AQ8WXH6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.59□□□□□ -2
RAB40AQ8WXH6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RAB40AQ8WXH6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RAB40AQ8WXH6 RNU6-797P-201ENST00000363101 109 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 Y_RNA.404-201ENST00000383978 102 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 SNORA29-201ENST00000384183 140 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 RPL19P1-201ENST00000411635 428 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 MTCO2P27-201ENST00000420740 428 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.58□□□□□ -2
RAB40AQ8WXH6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.58□□□□□ -2
RAB40AQ8WXH6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.58□□□□□ -2
RAB40AQ8WXH6 AC104389.3-201ENST00000445629 235 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 AL353752.1-201ENST00000454946 260 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 Y_RNA.653-201ENST00000459091 95 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 AC090515.1-201ENST00000465295 476 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.58□□□□□ -2
RAB40AQ8WXH6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.58□□□□□ -2
RAB40AQ8WXH6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.58□□□□□ -2
RAB40AQ8WXH6 AC005899.2-201ENST00000584353 90 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 C8orf59P2-201ENST00000603441 271 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 AL627309.6-201ENST00000606857 840 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 AC135507.2-201ENST00000612443 309 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 AC133104.2-201ENST00000615272 193 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 AL449363.1-201ENST00000617815 186 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 AC008121.3-201ENST00000618726 433 ntBASIC2.58□□□□□ -2
RAB40AQ8WXH6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
RAB40AQ8WXH6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.58□□□□□ -2
RAB40AQ8WXH6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RAB40AQ8WXH6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.57□□□□□ -2
RAB40AQ8WXH6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.57□□□□□ -2
RAB40AQ8WXH6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.57□□□□□ -2
RAB40AQ8WXH6 ZNF299P-201ENST00000406845 1804 ntBASIC2.57□□□□□ -2
RAB40AQ8WXH6 AC073325.2-201ENST00000339545 159 ntBASIC2.57□□□□□ -2
RAB40AQ8WXH6 RNU1-35P-201ENST00000362782 153 ntBASIC2.57□□□□□ -2
RAB40AQ8WXH6 Y_RNA.58-201ENST00000362807 102 ntBASIC2.57□□□□□ -2
RAB40AQ8WXH6 Y_RNA.154-201ENST00000363624 102 ntBASIC2.57□□□□□ -2
RAB40AQ8WXH6 SNORA71.1-201ENST00000364523 117 ntBASIC2.57□□□□□ -2
RAB40AQ8WXH6 RNY3P1-201ENST00000365085 102 ntBASIC2.57□□□□□ -2
RAB40AQ8WXH6 RNY3-201ENST00000365484 102 ntBASIC2.57□□□□□ -2
RAB40AQ8WXH6 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
RAB40AQ8WXH6 Y_RNA.490-201ENST00000384413 102 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms