Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 MTHFD2P2-201ENST00000407725 247 ntBASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 RNA5SP306-201ENST00000411087 107 ntBASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 SNORA71B-202ENST00000439232 272 ntBASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 HSPE1P13-201ENST00000451143 297 ntBASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 AC026726.1-201ENST00000512859 601 ntBASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 RNU6-1007P-201ENST00000516586 107 ntBASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 SNORA31.19-201ENST00000517079 126 ntBASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 AC002545.1-201ENST00000592511 181 ntBASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD1Q8NHV4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 AC068647.1-201ENST00000489539 2265 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 AL596211.1-201ENST00000569873 2277 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 RNU6-1048P-201ENST00000364054 107 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 SNORA73.2-201ENST00000364946 201 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 RNU6-294P-201ENST00000364999 102 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 SNORA62.3-201ENST00000365110 153 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 RNU6-1248P-201ENST00000391096 64 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 RPL26P27-201ENST00000414397 437 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 CYCSP49-201ENST00000420810 319 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 BPY2DP-201ENST00000422208 265 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 RNU6-625P-201ENST00000459412 107 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 AC139453.3-201ENST00000493276 369 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 UBE2CP3-201ENST00000502715 450 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 RAC1P2-201ENST00000511164 579 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 AC018448.1-201ENST00000552843 316 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 MIR4444-1-201ENST00000581696 74 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 MIR4444-2-201ENST00000584390 74 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 SNORA62.6-201ENST00000606322 83 ntBASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD1Q8NHV4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 Y_RNA.24-201ENST00000362508 103 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 RNU6-640P-201ENST00000363693 105 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 SNORD115-8-201ENST00000363856 82 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 SNORD115-38-201ENST00000365037 82 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 AL359837.1-201ENST00000381357 287 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 MIR93-201ENST00000385024 80 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 MIR34A-201ENST00000385130 110 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 MIR616-201ENST00000385293 97 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 RNU2-54P-201ENST00000410299 190 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 RNA5SP44-201ENST00000410446 133 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 ELOCP21-201ENST00000412558 336 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 EIF1AXP1-201ENST00000419267 435 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 AL031737.1-201ENST00000450125 223 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 AL121914.1-201ENST00000450188 156 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 AC092798.1-201ENST00000458542 409 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 AC146507.2-201ENST00000460608 476 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 RNU1-95P-201ENST00000516357 160 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 RNU1-128P-201ENST00000516704 160 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 MIR4429-201ENST00000580105 73 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 uc_338.28-201ENST00000612082 187 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 AC112200.1-201ENST00000625015 234 ntBASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
NEDD1Q8NHV4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 RNU6-1249P-201ENST00000363237 111 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 Y_RNA.348-201ENST00000365403 103 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 SNORA8.3-201ENST00000384679 139 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 MIR15B-201ENST00000385045 98 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 MT-TT-201ENST00000387460 66 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 AC009963.1-201ENST00000417265 157 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 GOT2P5-201ENST00000433995 546 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 AC243964.1-201ENST00000441814 261 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 AC245047.8-201ENST00000456455 284 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 RPL30P12-201ENST00000474666 353 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 HSPE1P6-201ENST00000479457 291 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 AL137849.1-201ENST00000604767 169 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 AC010999.1-201ENST00000611856 324 ntBASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
NEDD1Q8NHV4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 RNU6-873P-201ENST00000363833 107 ntBASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 SNORD32A-201ENST00000364805 84 ntBASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 RNU6-72P-201ENST00000384285 79 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms