Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC89Q8N998 AL663109.1-201ENST00000411498 844 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 AC009963.1-201ENST00000417265 157 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 FTH1P25-201ENST00000447665 469 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 TPTE2P5-203ENST00000458118 728 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 TPT1P7-201ENST00000458300 517 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 RNU6-1037P-201ENST00000459571 107 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 AC090255.1-201ENST00000495779 349 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC89Q8N998 CYP4A27P-201ENST00000567218 190 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC89Q8N998 BNIP3P22-201ENST00000593399 556 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 PCGEM1.1-201ENST00000613431 131 ntBASIC2.27□□□□□ -2.05
CCDC89Q8N998 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC89Q8N998 RNA5SP493-201ENST00000364115 91 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 RNU6-1322P-201ENST00000364309 107 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 U3.12-201ENST00000364498 214 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 Y_RNA.332-201ENST00000365271 113 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 MIR221-201ENST00000385135 110 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 RNU2-40P-201ENST00000410833 196 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 POLHP1-201ENST00000411806 470 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC89Q8N998 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC89Q8N998 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC89Q8N998 RNU6-261P-201ENST00000459506 102 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 AC083798.1-201ENST00000472671 131 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 RNA5SP401-201ENST00000515920 127 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 RNA5SP200-201ENST00000516360 103 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 RNA5SP281-201ENST00000516504 135 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 AC087854.1-201ENST00000519706 414 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 AC087441.2-201ENST00000529141 262 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 AC104383.1-201ENST00000530297 370 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC89Q8N998 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC89Q8N998 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC89Q8N998 AC245008.1-201ENST00000608123 476 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 AC073534.2-201ENST00000620377 381 ntBASIC2.26□□□□□ -2.05
CCDC89Q8N998 AL136360.1-201ENST00000503377 1900 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 CBX3P1-201ENST00000325243 554 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 RNU4-52P-201ENST00000384209 138 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CCDC89Q8N998 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC89Q8N998 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC89Q8N998 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC89Q8N998 CENPUP1-201ENST00000526649 1202 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC89Q8N998 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC89Q8N998 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC89Q8N998 EIF4A1P12-201ENST00000551910 141 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC89Q8N998 MIR4713-201ENST00000582691 75 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 Z98751.3-201ENST00000604447 521 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 RMST_6.1-201ENST00000611980 203 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 AC103705.1-201ENST00000619013 241 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 AL136221.1-201ENST00000621449 509 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC89Q8N998 MTND4P1-201ENST00000457501 1466 ntBASIC2.25□□□□□ -2.05
CCDC89Q8N998 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
CCDC89Q8N998 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CCDC89Q8N998 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CCDC89Q8N998 SNORD116-1-201ENST00000384335 95 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 SNORA51.11-201ENST00000384442 131 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 MTCO3P41-201ENST00000414801 328 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 AC123900.1-201ENST00000420390 96 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 HMGN2P38-201ENST00000423806 265 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 AC104564.1-201ENST00000493028 407 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 AC091885.1-201ENST00000506658 268 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 AC091874.1-201ENST00000511402 339 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 RNU6-405P-201ENST00000516637 110 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC89Q8N998 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC89Q8N998 AC009063.1-201ENST00000563342 702 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC89Q8N998 RPL17P51-201ENST00000605218 238 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 AL450472.1-202ENST00000637286 180 ntBASIC2.24□□□□□ -2.05
CCDC89Q8N998 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC89Q8N998 LINC02555-201ENST00000563933 1951 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 RNU4-66P-201ENST00000365199 138 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 RNU6-438P-201ENST00000365561 103 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 SNORD73A-201ENST00000386062 65 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 SNORA48.1-201ENST00000390879 135 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 RPL7P54-201ENST00000438336 674 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC89Q8N998 RNU1-131P-201ENST00000458943 161 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 AC025033.1-201ENST00000463883 194 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 AC022254.1-201ENST00000567857 235 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 MTND1P15-201ENST00000579262 949 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC89Q8N998 MIR5002-201ENST00000584713 97 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 AC092747.3-201ENST00000603769 301 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 AC064807.4-201ENST00000607201 407 ntBASIC2.23□□□□□ -2.05
CCDC89Q8N998 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC89Q8N998 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC89Q8N998 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CCDC89Q8N998 AC009541.1-201ENST00000438279 2662 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC89Q8N998 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms