Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.2□□□□□ -2.44
VPS8Q8N3P4 RAP1BP3-201ENST00000407180 549 ntBASIC-0.2□□□□□ -2.44
VPS8Q8N3P4 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.2□□□□□ -2.44
VPS8Q8N3P4 MTCO3P29-201ENST00000432119 779 ntBASIC-0.2□□□□□ -2.44
VPS8Q8N3P4 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.2□□□□□ -2.44
VPS8Q8N3P4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.2□□□□□ -2.44
VPS8Q8N3P4 AF038458.1-201ENST00000588406 262 ntBASIC-0.2□□□□□ -2.44
VPS8Q8N3P4 AC098483.2-201ENST00000603158 454 ntBASIC-0.2□□□□□ -2.44
VPS8Q8N3P4 AP001981.2-201ENST00000603241 418 ntBASIC-0.2□□□□□ -2.44
VPS8Q8N3P4 AC090517.2-201ENST00000614966 680 ntBASIC-0.2□□□□□ -2.44
VPS8Q8N3P4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 SNORD3E-201ENST00000362899 217 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 SNORD114-31-201ENST00000363219 75 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 AC005094.1-201ENST00000440420 368 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 AC069257.2-201ENST00000441819 155 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 FABP5P15-201ENST00000453566 214 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 RNU7-90P-201ENST00000459216 62 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 HMGN1P12-201ENST00000499125 195 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 RNU6-390P-201ENST00000516259 103 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 MIR4709-201ENST00000577272 72 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 SNORD3E-202ENST00000627253 216 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 U8.7-201ENST00000364940 136 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 RNU6-163P-201ENST00000384396 106 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 SNORA8.3-201ENST00000384679 139 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 MIR214-201ENST00000385214 110 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 RNA5SP222-201ENST00000411039 105 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 AL022718.1-201ENST00000412004 84 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 BX664727.1-201ENST00000416024 466 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 ELOCP9-201ENST00000418624 239 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 AC016256.1-201ENST00000547971 354 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 AL132657.2-201ENST00000564417 358 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 MIR3976-201ENST00000606807 139 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 RNU4-5P-201ENST00000607255 135 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 AC063943.3-201ENST00000615562 356 ntBASIC-0.21□□□□□ -2.44
VPS8Q8N3P4 CASC19-280ENST00000642102 1351 ntBASIC-0.22□□□□□ -2.44
VPS8Q8N3P4 SNORA63D-201ENST00000364359 132 ntBASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 RNU6-619P-201ENST00000365146 108 ntBASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 AL359704.1-201ENST00000411586 781 ntBASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 RNA5SP227-201ENST00000516184 113 ntBASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 AP003049.1-201ENST00000529418 457 ntBASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 BNIP3P6-201ENST00000549284 499 ntBASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 AC240442.1-201ENST00000616055 283 ntBASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.22□□□□□ -2.45
VPS8Q8N3P4 DBF4P1-201ENST00000412976 1892 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 RNA5SP98-201ENST00000363158 137 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 RNU6-657P-201ENST00000383904 107 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 RNU6-514P-201ENST00000384208 107 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 MTCO3P1-205ENST00000422088 832 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 ISCA1P1-201ENST00000426679 387 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 USP9YP22-201ENST00000438971 294 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 U7.7-201ENST00000459276 60 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 AC110760.3-202ENST00000515177 371 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 MIR4431-201ENST00000579990 94 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 AC096586.1-201ENST00000610267 561 ntBASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.23□□□□□ -2.45
VPS8Q8N3P4 RNU6-512P-201ENST00000364438 103 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 RNU4-48P-201ENST00000365559 182 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 MIR7-1-201ENST00000384871 110 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 RNA5SP219-201ENST00000390940 113 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 SNORA16.2-201ENST00000390991 127 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 Z99497.1-201ENST00000421282 135 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 SCARNA1-201ENST00000517138 166 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 AC022022.2-201ENST00000602989 360 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 AL158032.1-201ENST00000605401 106 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 AC097065.2-201ENST00000608159 533 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 AC021506.2-201ENST00000612354 169 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 uc_338.6-201ENST00000613544 171 ntBASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
VPS8Q8N3P4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 DAP3P1-201ENST00000441522 278 ntBASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 AC073910.1-201ENST00000445047 438 ntBASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 AC091874.1-201ENST00000511402 339 ntBASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 AP001180.6-201ENST00000584918 159 ntBASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 AC068620.3-201ENST00000602749 560 ntBASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 uc_338.34-201ENST00000617467 174 ntBASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 MIR4315-1-201ENST00000636800 73 ntBASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 MIR4315-2-201ENST00000640925 73 ntBASIC-0.25□□□□□ -2.45
VPS8Q8N3P4 AL079343.1-201ENST00000572358 1771 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 RNU6-223P-201ENST00000362830 107 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 RNU6-754P-201ENST00000391166 107 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 AC011233.1-201ENST00000422812 283 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms