Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCML4Q8N228 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
SCML4Q8N228 RNU6-1252P-201ENST00000363054 104 ntBASIC2.54□□□□□ -2
SCML4Q8N228 RNU6-254P-201ENST00000363377 107 ntBASIC2.54□□□□□ -2
SCML4Q8N228 CBX3P9-201ENST00000402326 552 ntBASIC2.54□□□□□ -2
SCML4Q8N228 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.54□□□□□ -2
SCML4Q8N228 MTND4LP16-201ENST00000440828 295 ntBASIC2.54□□□□□ -2
SCML4Q8N228 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.54□□□□□ -2
SCML4Q8N228 PPP1R2P5-201ENST00000457256 603 ntBASIC2.54□□□□□ -2
SCML4Q8N228 AC103851.1-201ENST00000506833 274 ntBASIC2.54□□□□□ -2
SCML4Q8N228 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.54□□□□□ -2
SCML4Q8N228 MTND3P22-201ENST00000510932 243 ntBASIC2.54□□□□□ -2
SCML4Q8N228 RNU6-1069P-201ENST00000516612 133 ntBASIC2.54□□□□□ -2
SCML4Q8N228 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.54□□□□□ -2
SCML4Q8N228 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
SCML4Q8N228 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
SCML4Q8N228 MIR3942-201ENST00000585264 109 ntBASIC2.54□□□□□ -2
SCML4Q8N228 AL356157.2-201ENST00000605122 111 ntBASIC2.54□□□□□ -2
SCML4Q8N228 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.54□□□□□ -2
SCML4Q8N228 AL133216.2-202ENST00000634512 349 ntBASIC2.54□□□□□ -2
SCML4Q8N228 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SCML4Q8N228 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SCML4Q8N228 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.53□□□□□ -2
SCML4Q8N228 RNU4-82P-201ENST00000362443 140 ntBASIC2.53□□□□□ -2
SCML4Q8N228 RNU6-212P-201ENST00000362642 104 ntBASIC2.53□□□□□ -2
SCML4Q8N228 RNU1-72P-201ENST00000362976 153 ntBASIC2.53□□□□□ -2
SCML4Q8N228 Y_RNA.184-201ENST00000363884 108 ntBASIC2.53□□□□□ -2
SCML4Q8N228 Y_RNA.356-201ENST00000365475 113 ntBASIC2.53□□□□□ -2
SCML4Q8N228 Y_RNA.529-201ENST00000384586 119 ntBASIC2.53□□□□□ -2
SCML4Q8N228 MIR561-201ENST00000385216 97 ntBASIC2.53□□□□□ -2
SCML4Q8N228 MT-TD-201ENST00000387419 68 ntBASIC2.53□□□□□ -2
SCML4Q8N228 AC007064.1-201ENST00000412238 351 ntBASIC2.53□□□□□ -2
SCML4Q8N228 AC008267.5-201ENST00000424928 265 ntBASIC2.53□□□□□ -2
SCML4Q8N228 MTND3P23-201ENST00000431980 347 ntBASIC2.53□□□□□ -2
SCML4Q8N228 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.53□□□□□ -2
SCML4Q8N228 RPL39P29-201ENST00000447779 157 ntBASIC2.53□□□□□ -2
SCML4Q8N228 RNU7-138P-201ENST00000459479 64 ntBASIC2.53□□□□□ -2
SCML4Q8N228 AL121594.1-201ENST00000475906 575 ntBASIC2.53□□□□□ -2
SCML4Q8N228 RPS27P27-201ENST00000498779 255 ntBASIC2.53□□□□□ -2
SCML4Q8N228 TRBVA-201ENST00000498804 316 ntBASIC2.53□□□□□ -2
SCML4Q8N228 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.53□□□□□ -2
SCML4Q8N228 SNORA48.11-201ENST00000517015 89 ntBASIC2.53□□□□□ -2
SCML4Q8N228 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.53□□□□□ -2
SCML4Q8N228 AC005668.1-201ENST00000571142 476 ntBASIC2.53□□□□□ -2
SCML4Q8N228 RPS3AP23-202ENST00000574601 686 ntBASIC2.53□□□□□ -2
SCML4Q8N228 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.53□□□□□ -2
SCML4Q8N228 MIR5692C1-201ENST00000585309 91 ntBASIC2.53□□□□□ -2
SCML4Q8N228 AL713866.2-201ENST00000603579 219 ntBASIC2.53□□□□□ -2
SCML4Q8N228 AL670379.2-201ENST00000604983 252 ntBASIC2.53□□□□□ -2
SCML4Q8N228 AL022345.1-201ENST00000607292 135 ntBASIC2.53□□□□□ -2
SCML4Q8N228 AL159153.1-201ENST00000619688 317 ntBASIC2.53□□□□□ -2
SCML4Q8N228 TPTEP1-208ENST00000636884 213 ntBASIC2.53□□□□□ -2
SCML4Q8N228 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SCML4Q8N228 Z82195.2-201ENST00000612348 18351 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 Y_RNA.301-201ENST00000364990 103 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCML4Q8N228 RNU6-1013P-201ENST00000384180 107 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 RPS29P13-201ENST00000402041 169 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 RNU6-1140P-201ENST00000410517 106 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.52□□□□□ -2.01
SCML4Q8N228 HMGB1P18-201ENST00000438801 619 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.52□□□□□ -2.01
SCML4Q8N228 AMD1P1-201ENST00000457220 922 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AC090515.1-201ENST00000465295 476 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.52□□□□□ -2.01
SCML4Q8N228 FGF7P4-201ENST00000509595 295 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.52□□□□□ -2.01
SCML4Q8N228 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.52□□□□□ -2.01
SCML4Q8N228 RNA5SP24-201ENST00000516478 95 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 RNU6-256P-201ENST00000516747 97 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 RNU1-104P-201ENST00000517280 175 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AC087854.1-201ENST00000519706 414 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AC105029.1-201ENST00000520250 669 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.52□□□□□ -2.01
SCML4Q8N228 AP000889.1-201ENST00000530968 660 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AP000889.2-201ENST00000532684 490 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
SCML4Q8N228 IMMP1LP2-201ENST00000552954 492 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.52□□□□□ -2.01
SCML4Q8N228 MIR4513-201ENST00000581077 86 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 MIR3672-201ENST00000584290 82 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.52□□□□□ -2.01
SCML4Q8N228 AC243960.4-201ENST00000600532 288 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AL132765.2-201ENST00000610812 351 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AC104237.2-201ENST00000612456 443 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 FAM157A-202ENST00000615155 405 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 AC112487.2-201ENST00000637950 304 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCML4Q8N228 AC069528.2-201ENST00000624849 1991 ntBASIC2.52□□□□□ -2.01
SCML4Q8N228 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCML4Q8N228 MIR449A-201ENST00000362113 91 ntBASIC2.51□□□□□ -2.01
SCML4Q8N228 Y_RNA.61-201ENST00000362835 102 ntBASIC2.51□□□□□ -2.01
SCML4Q8N228 MIR544A-201ENST00000384855 91 ntBASIC2.51□□□□□ -2.01
SCML4Q8N228 MIR29B2-201ENST00000385055 81 ntBASIC2.51□□□□□ -2.01
SCML4Q8N228 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SCML4Q8N228 MIR450B-201ENST00000401182 78 ntBASIC2.51□□□□□ -2.01
SCML4Q8N228 RN7SKP158-201ENST00000410453 326 ntBASIC2.51□□□□□ -2.01
SCML4Q8N228 VN1R36P-201ENST00000414936 291 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms