Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.09□□□□□ -1.91
KRT78Q8N1N4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.2-201ENST00000362330 96 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 RNA5SP72-201ENST00000364442 117 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 U8.8-201ENST00000365399 135 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 RNU6-1050P-201ENST00000410388 107 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 RPS12P18-201ENST00000442381 270 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 GPM6BP3-201ENST00000442797 145 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.09□□□□□ -1.91
KRT78Q8N1N4 PRSS3P4-201ENST00000453323 162 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC146507.2-201ENST00000460608 476 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC073901.1-201ENST00000462471 408 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC140059.1-201ENST00000489238 361 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC006445.1-201ENST00000491925 405 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC104564.1-201ENST00000493028 407 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.661-201ENST00000516003 99 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 RNU2-53P-201ENST00000516257 147 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.09□□□□□ -1.91
KRT78Q8N1N4 MIR1254-2-201ENST00000579553 63 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 MIR4429-201ENST00000580105 73 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC018462.2-201ENST00000605375 395 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AL359198.2-201ENST00000611836 194 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC133104.2-201ENST00000615272 193 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC084757.4-201ENST00000616350 526 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC012314.7-201ENST00000619693 93 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 AC092608.2-201ENST00000624427 218 ntBASIC3.09□□□□□ -1.91
KRT78Q8N1N4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRT78Q8N1N4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.09□□□□□ -1.92
KRT78Q8N1N4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
KRT78Q8N1N4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KRT78Q8N1N4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 U3.6-201ENST00000363622 211 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.463-201ENST00000384271 102 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 RNY1P14-201ENST00000384426 108 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 RNU6-1026P-201ENST00000384465 108 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.574-201ENST00000384766 95 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 YME1L1P1-201ENST00000429435 297 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AC236972.1-201ENST00000433225 199 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AC244670.1-201ENST00000436879 112 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AC006028.1-201ENST00000438379 402 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 RPS15AP7-201ENST00000439294 405 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AL031659.1-201ENST00000447075 539 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 FTH1P25-201ENST00000447665 469 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 MRPS35P2-201ENST00000508242 191 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 MIR4444-1-201ENST00000581696 74 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 MIR4444-2-201ENST00000584390 74 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AC069294.1-201ENST00000608397 350 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 uc_338.25-201ENST00000613756 156 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 AC080128.1-201ENST00000474389 1917 ntBASIC3.08□□□□□ -1.92
KRT78Q8N1N4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
KRT78Q8N1N4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.07□□□□□ -1.92
KRT78Q8N1N4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.07□□□□□ -1.92
KRT78Q8N1N4 AC092268.1-201ENST00000342691 405 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KRT78Q8N1N4 RNU6-529P-201ENST00000363383 104 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.153-201ENST00000363615 91 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 RNU6-890P-201ENST00000384121 107 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.473-201ENST00000384333 102 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.594-201ENST00000410373 140 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 DPH3P2-201ENST00000422618 250 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 AC078809.1-201ENST00000427601 140 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 MICF-203ENST00000432679 129 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 RPL23AP50-201ENST00000434149 455 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.07□□□□□ -1.92
KRT78Q8N1N4 SNORD5.1-201ENST00000458800 75 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 RPS29P27-201ENST00000463711 170 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 AC015911.1-201ENST00000495111 156 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 CKS1BP2-201ENST00000497342 240 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 AC097473.1-201ENST00000508142 408 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 RNU6-307P-201ENST00000516743 106 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.07□□□□□ -1.92
KRT78Q8N1N4 MIR2682-201ENST00000580305 110 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 AC005357.1-201ENST00000588399 301 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 AC009229.3-201ENST00000608056 282 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 AC098657.3-201ENST00000620434 263 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.07□□□□□ -1.92
KRT78Q8N1N4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KRT78Q8N1N4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRT78Q8N1N4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
KRT78Q8N1N4 KPNA2P1-201ENST00000458289 1591 ntBASIC3.07□□□□□ -1.92
KRT78Q8N1N4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms