Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 Y_RNA.124-201ENST00000363339 93 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 RNU6-978P-201ENST00000364371 103 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 RNU6-880P-201ENST00000384526 107 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 SNORD96B-201ENST00000386148 79 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 Y_RNA.587-201ENST00000391210 103 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 RN7SKP284-201ENST00000411002 343 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 AL353748.1-201ENST00000440753 474 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 AC078918.1-201ENST00000498515 228 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 Y_RNA.677-201ENST00000516401 85 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 AC011602.1-201ENST00000546484 331 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 RPL30P11-203ENST00000598995 310 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 AP003357.1-201ENST00000604497 148 ntBASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC116Q8IYX3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 RNA5SP513-201ENST00000364648 118 ntBASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 SNORA71.2-201ENST00000364941 134 ntBASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 RNA5SP87-201ENST00000384155 118 ntBASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 MIR921-201ENST00000401133 56 ntBASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 AC009237.10-201ENST00000414112 510 ntBASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 RPL23AP1-201ENST00000428990 471 ntBASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 AC145146.1-201ENST00000496370 254 ntBASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 AC092435.4-201ENST00000623012 4159 ntBASIC4.31□□□□□ -1.72
CCDC116Q8IYX3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 AC021146.4-201ENST00000309229 279 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 MIR1183-201ENST00000408856 89 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 HSPE1P12-201ENST00000412576 301 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 AC006028.1-201ENST00000438379 402 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 snoU13.14-201ENST00000459372 104 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 MIR4270-201ENST00000581799 70 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 AC091178.1-203ENST00000584586 279 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 RPS15AP11-201ENST00000594193 385 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 uc_338.28-201ENST00000612082 187 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 AC005086.4-201ENST00000623065 213 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 OR56B2P-202ENST00000641377 2453 ntBASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CCDC116Q8IYX3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 RNU6-50P-201ENST00000362356 103 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 Y_RNA.116-201ENST00000363292 103 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 RNU6-647P-201ENST00000364243 107 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 RNU6-1080P-201ENST00000383982 107 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 Y_RNA.432-201ENST00000384087 111 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 SNORD116-13-201ENST00000384408 92 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 MIR548A1-201ENST00000385041 97 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 MIR607-201ENST00000385241 96 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 Y_RNA.617-201ENST00000410920 90 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 AL445584.1-201ENST00000431451 330 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 VDAC1P3-201ENST00000434069 851 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 AL358232.1-201ENST00000448030 501 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 RPS26P45-201ENST00000471748 340 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 AC084357.1-201ENST00000473404 255 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 IGLV2-34-201ENST00000490007 283 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 RNA5SP446-201ENST00000515955 82 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 RNU6-781P-201ENST00000516377 101 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 RNA5SP73-201ENST00000516744 108 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms