Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 Y_RNA.797-201ENST00000515977 94 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 RNU5F-2P-201ENST00000516066 82 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 RNA5SP49-201ENST00000516450 115 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 AC105137.2-201ENST00000569073 466 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 AC091178.1-203ENST00000584586 279 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 AC006380.1-201ENST00000603598 186 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 SNORA51-201ENST00000606420 132 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 Y_RNA.802-201ENST00000614892 130 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 CPHL1P-201ENST00000461341 3407 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 Y_RNA.329-201ENST00000365209 107 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 RNA5SP151-201ENST00000365632 117 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 Y_RNA.420-201ENST00000384043 110 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 Y_RNA.542-201ENST00000384641 111 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 MIR3065-201ENST00000390137 79 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 MIR921-201ENST00000401133 56 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 CBX3P9-201ENST00000402326 552 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 EBAG9P1-201ENST00000418955 543 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 AC012671.1-201ENST00000451912 203 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 AC107626.1-201ENST00000471084 183 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 RNA5SP497-201ENST00000516081 97 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 IFITM8P-201ENST00000522529 394 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 CYCSP26-201ENST00000534107 320 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 AC009127.3-201ENST00000570531 403 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 MIR4679-2-201ENST00000578358 77 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 DNAJC19P2-201ENST00000593340 302 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 AL034408.1-202ENST00000636088 415 ntBASIC4.55□□□□□ -1.68
RNF135Q8IUD6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF135Q8IUD6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RNF135Q8IUD6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF135Q8IUD6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF135Q8IUD6 RNA5SP119-201ENST00000362715 117 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 RNU6-899P-201ENST00000363947 107 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 RNU6-1264P-201ENST00000383891 107 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 RNU1-63P-201ENST00000383902 164 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 RNU6-429P-201ENST00000384582 108 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 MIR491-201ENST00000384877 84 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF135Q8IUD6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF135Q8IUD6 VWA8P1-201ENST00000510889 176 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 RNA5SP446-201ENST00000515955 82 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 SNORA74D-201ENST00000516404 141 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 RNU2-12P-201ENST00000517216 168 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF135Q8IUD6 MIR5685-201ENST00000579080 79 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 MIR4431-201ENST00000579990 94 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 AC079587.1-201ENST00000603846 277 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 AL034555.1-201ENST00000604816 211 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 MIR6076-201ENST00000617521 113 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF135Q8IUD6 AC140113.4-201ENST00000622087 222 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 MIR3658-201ENST00000636291 56 ntBASIC4.54□□□□□ -1.68
RNF135Q8IUD6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF135Q8IUD6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF135Q8IUD6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 Y_RNA.563-201ENST00000384707 108 ntBASIC4.53□□□□□ -1.68
RNF135Q8IUD6 HSPE1P26-201ENST00000405341 275 ntBASIC4.53□□□□□ -1.68
RNF135Q8IUD6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.53□□□□□ -1.68
RNF135Q8IUD6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 Y_RNA.637-201ENST00000459424 114 ntBASIC4.53□□□□□ -1.68
RNF135Q8IUD6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 RNU6-659P-201ENST00000516454 104 ntBASIC4.53□□□□□ -1.68
RNF135Q8IUD6 MIR3613-201ENST00000579844 87 ntBASIC4.53□□□□□ -1.68
RNF135Q8IUD6 MIR3200-201ENST00000580767 85 ntBASIC4.53□□□□□ -1.68
RNF135Q8IUD6 AL160290.3-201ENST00000604869 165 ntBASIC4.53□□□□□ -1.68
RNF135Q8IUD6 TUG1_4.1-201ENST00000619464 181 ntBASIC4.53□□□□□ -1.68
RNF135Q8IUD6 AC012314.7-201ENST00000619693 93 ntBASIC4.53□□□□□ -1.68
RNF135Q8IUD6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF135Q8IUD6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RNF135Q8IUD6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF135Q8IUD6 RNU1-20P-201ENST00000363314 162 ntBASIC4.52□□□□□ -1.69
RNF135Q8IUD6 RNA5SP267-201ENST00000364893 126 ntBASIC4.52□□□□□ -1.69
RNF135Q8IUD6 Y_RNA.415-201ENST00000384012 112 ntBASIC4.52□□□□□ -1.69
RNF135Q8IUD6 RNU6-19P-201ENST00000384718 107 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms