Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC107626.1-201ENST00000471084 183 ntBASIC4.13□□□□□ -1.75
USP48Q86UV5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.13□□□□□ -1.75
USP48Q86UV5 AP001025.1-201ENST00000486139 332 ntBASIC4.13□□□□□ -1.75
USP48Q86UV5 AC091874.1-201ENST00000511402 339 ntBASIC4.13□□□□□ -1.75
USP48Q86UV5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.13□□□□□ -1.75
USP48Q86UV5 RNU6-579P-201ENST00000516879 102 ntBASIC4.13□□□□□ -1.75
USP48Q86UV5 MIR2276-201ENST00000516886 89 ntBASIC4.13□□□□□ -1.75
USP48Q86UV5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.13□□□□□ -1.75
USP48Q86UV5 AC016256.1-201ENST00000547971 354 ntBASIC4.13□□□□□ -1.75
USP48Q86UV5 MIR4276-201ENST00000584832 70 ntBASIC4.13□□□□□ -1.75
USP48Q86UV5 AC078899.3-201ENST00000599065 212 ntBASIC4.13□□□□□ -1.75
USP48Q86UV5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP48Q86UV5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP48Q86UV5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.12□□□□□ -1.75
USP48Q86UV5 AC010615.1-201ENST00000594254 1764 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 RBBP8P1-201ENST00000449447 1844 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP48Q86UV5 RNU6-1141P-201ENST00000364520 107 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 RNU6-19P-201ENST00000384718 107 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 MIR591-201ENST00000385290 95 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 AL357075.1-201ENST00000404107 726 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 MIR548I3-201ENST00000408378 149 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 MIR548I1-201ENST00000408810 149 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 RNU2-49P-201ENST00000410666 184 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 BX679664.1-201ENST00000434429 253 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 FCF1P4-201ENST00000448326 183 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.12□□□□□ -1.75
USP48Q86UV5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.12□□□□□ -1.75
USP48Q86UV5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.12□□□□□ -1.75
USP48Q86UV5 SNRPGP7-201ENST00000469016 106 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 RPL23AP75-201ENST00000491601 451 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.12□□□□□ -1.75
USP48Q86UV5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.12□□□□□ -1.75
USP48Q86UV5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.12□□□□□ -1.75
USP48Q86UV5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.12□□□□□ -1.75
USP48Q86UV5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.12□□□□□ -1.75
USP48Q86UV5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.12□□□□□ -1.75
USP48Q86UV5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
USP48Q86UV5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
USP48Q86UV5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.11□□□□□ -1.75
USP48Q86UV5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP48Q86UV5 MIR422A-201ENST00000362286 90 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 RNA5SP126-201ENST00000365092 109 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 Y_RNA.551-201ENST00000384661 102 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 RN7SKP284-201ENST00000411002 343 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 AC009296.1-201ENST00000443146 155 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 AC016632.1-201ENST00000503994 196 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.11□□□□□ -1.75
USP48Q86UV5 SNORA25.11-201ENST00000515935 105 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 SNORA31.21-201ENST00000517180 77 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP48Q86UV5 HSPE1P4-201ENST00000550617 308 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.11□□□□□ -1.75
USP48Q86UV5 AC090517.1-201ENST00000569307 266 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 AC090897.2-201ENST00000581715 130 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 RPS29P30-201ENST00000600975 111 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 AC091152.3-201ENST00000604227 325 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 RPL23AP88-201ENST00000605759 454 ntBASIC4.11□□□□□ -1.75
USP48Q86UV5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.11□□□□□ -1.75
USP48Q86UV5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.1□□□□□ -1.75
USP48Q86UV5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP48Q86UV5 RNU4-50P-201ENST00000364361 141 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 Y_RNA.288-201ENST00000364854 92 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 Y_RNA.461-201ENST00000384263 103 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 RNU6-622P-201ENST00000384272 103 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 Y_RNA.489-201ENST00000384410 101 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 SNORA51.11-201ENST00000384442 131 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 RNU6-748P-201ENST00000384648 107 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 RN7SKP111-201ENST00000410349 271 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 AC096649.2-201ENST00000416186 393 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 Z82188.1-201ENST00000436709 154 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.1□□□□□ -1.75
USP48Q86UV5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.1□□□□□ -1.75
USP48Q86UV5 AL441985.1-201ENST00000457727 251 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 RNU7-87P-201ENST00000459343 62 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 AC109329.1-201ENST00000518744 317 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 IGHV3-76-201ENST00000522465 295 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.1□□□□□ -1.75
USP48Q86UV5 AC007375.1-201ENST00000554513 578 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 MIR3128-201ENST00000581957 66 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 AC006557.5-201ENST00000603126 811 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 AL162713.1-201ENST00000604480 262 ntBASIC4.1□□□□□ -1.75
USP48Q86UV5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP48Q86UV5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP48Q86UV5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP48Q86UV5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
USP48Q86UV5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
USP48Q86UV5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP48Q86UV5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.09□□□□□ -1.75
USP48Q86UV5 Y_RNA.105-201ENST00000363182 111 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 SNORA5B-201ENST00000363786 132 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 SNORD115-32-201ENST00000364079 82 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 U3.13-201ENST00000364804 214 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 RNU6-708P-201ENST00000384217 107 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 Y_RNA.504-201ENST00000384481 104 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 RN7SKP61-201ENST00000410642 295 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 RPL39P29-201ENST00000447779 157 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 RPS4XP2-201ENST00000458402 793 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 RPL30P1-201ENST00000488676 339 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 AC006445.1-201ENST00000491925 405 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms