Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AL359854.1-201ENST00000614203 1594 ntBASIC3.65□□□□□ -1.82
RNF111Q6ZNA4 MAPK10-373ENST00000641983 6772 ntBASIC3.65□□□□□ -1.82
RNF111Q6ZNA4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 RNA5SP310-201ENST00000459084 116 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 AC084357.1-201ENST00000473404 255 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 AC090525.1-201ENST00000479116 478 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 MTND5P41-201ENST00000517498 206 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 MRPS18CP4-201ENST00000535821 231 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 AC011602.1-201ENST00000546484 331 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 YPEL5P3-201ENST00000547227 352 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 AC006199.1-201ENST00000548728 219 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 MIR4425-201ENST00000580572 84 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 MIR3145-201ENST00000580727 82 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 AC090897.2-201ENST00000581715 130 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 AC244505.7-201ENST00000599675 272 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 AC022441.3-201ENST00000605737 136 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 AL110115.1-201ENST00000614396 364 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 AC092628.2-201ENST00000622492 339 ntBASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF111Q6ZNA4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 Y_RNA.179-201ENST00000363844 90 ntBASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 Y_RNA.240-201ENST00000364469 95 ntBASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 SNORA26.3-201ENST00000391119 136 ntBASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 SNORA57.1-201ENST00000391227 145 ntBASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 RN7SL132P-201ENST00000478131 296 ntBASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 AC006445.2-201ENST00000510061 472 ntBASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 RNU6-1219P-201ENST00000516143 112 ntBASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 AC233702.2-202ENST00000562547 291 ntBASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 MIR4308-201ENST00000580634 81 ntBASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF111Q6ZNA4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 AC110491.1-201ENST00000562191 2010 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 Y_RNA.101-201ENST00000363154 102 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RNU4-80P-201ENST00000363200 141 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RNA5SP197-201ENST00000363357 119 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 Y_RNA.291-201ENST00000364886 113 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RNU6-622P-201ENST00000384272 103 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 Y_RNA.498-201ENST00000384460 102 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RNA5SP390-201ENST00000410191 113 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RPS26P42-201ENST00000413485 326 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RNU7-170P-201ENST00000459303 61 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RNU7-200P-201ENST00000516105 62 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RNU2-58P-201ENST00000516403 183 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 RN7SKP209-201ENST00000516888 304 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 AC018448.1-201ENST00000552843 316 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 HMGN2P15-201ENST00000585707 270 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 AC004832.4-201ENST00000608952 331 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF111Q6ZNA4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AL109809.4-201ENST00000603520 2185 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 RNU6-727P-201ENST00000363592 107 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 Y_RNA.217-201ENST00000364214 105 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AP002088.1-201ENST00000382740 395 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 RNY1P5-201ENST00000383890 115 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 EI24P2-201ENST00000397776 1076 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AL512633.1-201ENST00000399931 655 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 RNA5SP239-201ENST00000410218 129 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 Y_RNA.641-201ENST00000459414 105 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AC091179.3-201ENST00000474761 144 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AC110768.1-201ENST00000509222 400 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 MIR3144-201ENST00000579460 79 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms