Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR591-201ENST00000385290 95 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 RNA5SP494-201ENST00000410653 129 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 RNU2-68P-201ENST00000410878 191 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 AC007560.1-201ENST00000426912 237 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 SNRPEP9-201ENST00000436794 238 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 HMGN2P20-201ENST00000437531 273 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 AC104564.1-201ENST00000493028 407 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 MTND1P19-201ENST00000511780 315 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 RNU6-612P-201ENST00000516909 102 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 AC109479.2-201ENST00000517842 174 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 CYCSP39-201ENST00000565821 309 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 AC090517.1-201ENST00000569307 266 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 MIR4474-201ENST00000579189 78 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 AC004852.3-201ENST00000614131 326 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 U2.21-201ENST00000637295 81 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.152-201ENST00000363578 100 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 RNU6-708P-201ENST00000384217 107 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 RNU6-72P-201ENST00000384285 79 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.518-201ENST00000384552 113 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 RNU6-851P-201ENST00000384565 107 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 MIR518D-201ENST00000385014 87 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 MIR625-201ENST00000385047 85 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 MIR325-201ENST00000385260 98 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 RNU6-130P-201ENST00000411112 103 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 MTND3P9-201ENST00000429526 346 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 AC022018.1-201ENST00000430685 241 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 ARL5AP4-201ENST00000430731 512 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 U8.21-201ENST00000459536 136 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 RPL30P10-201ENST00000488148 337 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 AC083906.5-201ENST00000503722 328 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 AC091826.1-201ENST00000514065 313 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 SNORA25.11-201ENST00000515935 105 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 RNU2-53P-201ENST00000516257 147 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 RNU6-911P-201ENST00000516523 104 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 SCARNA13-201ENST00000516672 275 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 AC107016.2-201ENST00000547968 190 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 MIR4325-201ENST00000583049 90 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 AC005000.2-201ENST00000605468 310 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 AL159153.1-201ENST00000619688 317 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 AC090740.1-201ENST00000623193 2262 ntBASIC2.79□□□□□ -1.96
ZNF549Q6P9A3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 FTLP6-201ENST00000355274 422 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 RNU6-78P-201ENST00000362897 107 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.105-201ENST00000363182 111 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 SNORA18.3-201ENST00000384122 132 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.447-201ENST00000384184 113 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.483-201ENST00000384380 101 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 SAR1AP2-201ENST00000392696 594 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.592-201ENST00000410274 109 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 RNU6-847P-201ENST00000411115 108 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 Z92545.1-201ENST00000411782 234 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 AC092423.1-201ENST00000430165 186 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 MTCO3P8-201ENST00000453691 755 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 snoU109.2-201ENST00000459316 135 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 S100A11P2-201ENST00000467589 312 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 AK3P2-201ENST00000507976 429 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 AC107222.1-201ENST00000510899 637 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 RNU6-388P-201ENST00000517012 105 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 RNU6-389P-201ENST00000517048 105 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 CASP1P1-201ENST00000526345 212 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 MTND4LP5-201ENST00000605152 292 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 AL162274.2-201ENST00000614406 332 ntBASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
ZNF549Q6P9A3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.64-201ENST00000362845 102 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 RNU6-778P-201ENST00000363269 103 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.376-201ENST00000365638 108 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 RNU6-217P-201ENST00000384164 104 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.461-201ENST00000384263 103 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 RNU6-140P-201ENST00000384566 108 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 MIR34A-201ENST00000385130 110 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 MIR493-201ENST00000385254 89 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 SNORA48.2-201ENST00000390926 124 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 UBA52P6-201ENST00000399822 382 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 RNU6-121P-201ENST00000410525 99 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC009310.1-201ENST00000414414 451 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 USP9YP16-201ENST00000430287 407 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 MTCO3P29-201ENST00000432119 779 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 NDUFB4P6-201ENST00000436819 366 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms