Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.33□□□□□ -1.88
PPP4R3AQ6IN85 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.33□□□□□ -1.88
PPP4R3AQ6IN85 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 RNY1P16-201ENST00000363063 111 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 Y_RNA.112-201ENST00000363250 102 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 SNORA9.2-201ENST00000365361 133 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 RNU6-843P-201ENST00000384454 104 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 SNORA44-201ENST00000384584 132 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AL035666.1-201ENST00000446195 348 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AC107626.1-201ENST00000471084 183 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AC105758.1-201ENST00000506038 399 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AC011471.1-201ENST00000585766 187 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AL137843.1-201ENST00000605078 385 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AC009318.2-201ENST00000610917 651 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 AC007485.1-201ENST00000616755 206 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 MIR3529-201ENST00000637713 78 ntBASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PPP4R3AQ6IN85 MTND4P1-201ENST00000457501 1466 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 Y_RNA.202-201ENST00000364083 110 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 RNU6-1180P-201ENST00000364935 107 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 UBA52P6-201ENST00000399822 382 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 EIF4EP2-201ENST00000422816 654 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 AC018865.2-201ENST00000423631 129 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 AL139132.1-201ENST00000431587 344 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 AC004383.1-201ENST00000438135 289 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 UBBP3-201ENST00000445497 241 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 AC079354.2-201ENST00000453523 154 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 RPL17P19-201ENST00000489069 552 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 SNORD19.2-201ENST00000516978 73 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 MRPS36P4-201ENST00000534436 298 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 AC103810.1-201ENST00000579873 453 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 AC006157.1-201ENST00000611750 366 ntBASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.31□□□□□ -1.88
PPP4R3AQ6IN85 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 Y_RNA.28-201ENST00000362554 111 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 Y_RNA.148-201ENST00000363557 117 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 Y_RNA.162-201ENST00000363683 102 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 SNORD56.5-201ENST00000364281 72 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 SNORA33.2-201ENST00000365413 134 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 RNU6-784P-201ENST00000384330 106 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 MIR627-201ENST00000384979 97 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 AL512633.1-201ENST00000399931 655 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 FO393413.1-201ENST00000402892 195 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 AC008267.5-201ENST00000424928 265 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 OSTCP8-201ENST00000445117 448 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 GSTA11P-201ENST00000452866 669 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 RPS29P26-201ENST00000477483 171 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 AC097462.2-201ENST00000504623 481 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 SCGB1D5P-201ENST00000515134 247 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 MIR5696-201ENST00000578474 85 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 ZNF299P-201ENST00000406845 1804 ntBASIC3.3□□□□□ -1.88
PPP4R3AQ6IN85 AL365361.1-201ENST00000566942 3481 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 SNORA68.1-201ENST00000364537 132 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 SNORD32A-201ENST00000364805 84 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 RNY1P14-201ENST00000384426 108 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 MIR147B-201ENST00000390185 80 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 NDUFB4P4-201ENST00000404822 243 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 MTND4P19-201ENST00000446659 478 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 GZMAP1-201ENST00000503054 631 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 RNU6-988P-201ENST00000519081 107 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 AC090897.2-201ENST00000581715 130 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 AL360085.1-201ENST00000604713 532 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 MIR1244-1-201ENST00000612829 85 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 MIR1244-3-201ENST00000635744 85 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 MIR1244-2-201ENST00000636449 85 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 MIR1244-4-202ENST00000636813 85 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.29□□□□□ -1.88
PPP4R3AQ6IN85 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.28□□□□□ -1.88
PPP4R3AQ6IN85 RNY3P11-201ENST00000364153 102 ntBASIC3.28□□□□□ -1.88
PPP4R3AQ6IN85 Y_RNA.252-201ENST00000364556 101 ntBASIC3.28□□□□□ -1.88
PPP4R3AQ6IN85 U3.13-201ENST00000364804 214 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms