Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AL137100.2-201ENST00000555786 315 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 AC037487.3-201ENST00000606668 112 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 AL110115.1-201ENST00000614396 364 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 AC048347.1-201ENST00000624621 427 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 SNORA43.4-201ENST00000629559 138 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 Y_RNA.270-201ENST00000364693 104 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 Y_RNA.274-201ENST00000364714 101 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 RNU6-1280P-201ENST00000365211 107 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 RNU6-487P-201ENST00000365430 104 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 U8.10-201ENST00000384260 133 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 FTH1P15-201ENST00000406984 280 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 U3.39-201ENST00000408569 239 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 SNORD12B-201ENST00000410433 91 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 RNU2-37P-201ENST00000410695 177 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 AL358075.3-201ENST00000426289 226 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 MTND2P29-201ENST00000438595 412 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 AC104332.1-201ENST00000440471 797 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 HMGN2P10-201ENST00000448085 265 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 SSXP4-201ENST00000451349 245 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 RPL26P9-201ENST00000457466 433 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 AC091874.1-201ENST00000511402 339 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 AC021231.3-201ENST00000558497 370 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 AC009163.5-201ENST00000575421 637 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 AC011476.5-201ENST00000615594 130 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 AC005296.1-201ENST00000616145 209 ntBASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
USPL1Q5W0Q7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 Y_RNA.269-201ENST00000364685 89 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 RNU6-159P-201ENST00000391080 106 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 MIR1298-201ENST00000408783 112 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 RNA5SP390-201ENST00000410191 113 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 AC002075.2-201ENST00000425207 252 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 GPM6BP3-201ENST00000442797 145 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 HSPE1P25-201ENST00000455484 251 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 SCARNA24.2-201ENST00000516968 130 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 SNORA31.23-201ENST00000517219 133 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 HSPE1P4-201ENST00000550617 308 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 MIR4423-201ENST00000580922 80 ntBASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.32□□□□□ -1.72
USPL1Q5W0Q7 AC110491.1-201ENST00000562191 2010 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RNU6-858P-201ENST00000362436 107 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 Y_RNA.83-201ENST00000363005 113 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RNA5SP197-201ENST00000363357 119 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RNU1-140P-201ENST00000365040 165 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RNU6-281P-201ENST00000384212 103 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 Y_RNA.504-201ENST00000384481 104 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 MIR544A-201ENST00000384855 91 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 MIR10B-201ENST00000385011 110 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RNU2-20P-201ENST00000410425 191 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RPS26P42-201ENST00000413485 326 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 COTL1P1-201ENST00000422309 375 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 AC006989.1-201ENST00000427212 131 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 AC012308.1-201ENST00000451232 178 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 NDUFB4P10-201ENST00000452541 359 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 HMGN2P16-201ENST00000456802 261 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RPL27AP5-201ENST00000469428 449 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RN7SL594P-201ENST00000470590 287 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RNU1-61P-201ENST00000516107 151 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RNA5SP54-201ENST00000516951 92 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 MIR4738-201ENST00000579134 87 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 AL162713.1-201ENST00000604480 262 ntBASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USPL1Q5W0Q7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms