Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 GHRLOS.1-201ENST00000610995 70 ntBASIC0□□□□□ -2.41
CCDC58Q4VC31 CDR1-202ENST00000625883 1485 ntBASIC0□□□□□ -2.41
CCDC58Q4VC31 PCMTD1P7-201ENST00000634506 357 ntBASIC0□□□□□ -2.41
CCDC58Q4VC31 MIR924-201ENST00000638017 53 ntBASIC0□□□□□ -2.41
CCDC58Q4VC31 SNORA25.9-201ENST00000365087 128 ntBASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 RNU6-72P-201ENST00000384285 79 ntBASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 AL365338.1-201ENST00000422282 858 ntBASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 MTCO2P1-201ENST00000424648 477 ntBASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 SEPT7P5-201ENST00000434048 306 ntBASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 RNU6-922P-201ENST00000516753 99 ntBASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 AC116165.2-201ENST00000616705 206 ntBASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 AL157770.1-201ENST00000623049 439 ntBASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 AP000676.3-201ENST00000623299 569 ntBASIC-0.01□□□□□ -2.41
CCDC58Q4VC31 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 RNU6-438P-201ENST00000365561 103 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 RNU6-163P-201ENST00000384396 106 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 RNU6-342P-201ENST00000384521 104 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 SNORA12-201ENST00000391162 147 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 AL031313.1-201ENST00000448435 256 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 RNU6-583P-201ENST00000516012 92 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 AC007834.2-201ENST00000536310 343 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 AL136363.2-201ENST00000604173 851 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 RAC1P9-201ENST00000604990 392 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 AC006270.3-201ENST00000605967 1036 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 AC100814.1-201ENST00000606963 623 ntBASIC-0.02□□□□□ -2.41
CCDC58Q4VC31 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 SNORA32.2-201ENST00000384049 122 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 RNU6-45P-201ENST00000384471 107 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 RNA5SP511-201ENST00000410487 115 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 AC068533.2-201ENST00000411872 306 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 MTND5P14-201ENST00000441481 1267 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 NFU1P2-201ENST00000448700 469 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 AL583843.1-201ENST00000456070 346 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 RNU7-59P-201ENST00000459101 61 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 MIR4431-201ENST00000579990 94 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 MIR4742-201ENST00000581069 85 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 MIR4293-201ENST00000584305 78 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 AC112191.3-201ENST00000604371 277 ntBASIC-0.03□□□□□ -2.41
CCDC58Q4VC31 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 MTND5P16-201ENST00000460269 1703 ntBASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 HMGB1P28-201ENST00000507778 552 ntBASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 MTND1P36-201ENST00000522384 936 ntBASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 AC007363.1-201ENST00000604736 620 ntBASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 AL356157.2-201ENST00000605122 111 ntBASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 AC018889.1-201ENST00000605372 397 ntBASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.04□□□□□ -2.42
CCDC58Q4VC31 SNORD65.1-201ENST00000390889 71 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 SNORA12.2-201ENST00000391040 156 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 RPL21P1-201ENST00000399532 476 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 AL079342.2-201ENST00000403367 482 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 RNU6-953P-201ENST00000459154 107 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 AL049830.1-201ENST00000468034 425 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 AC027338.1-201ENST00000514840 825 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 RNU6-64P-201ENST00000517119 105 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 MIR4789-201ENST00000577469 82 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 LARP7P1-201ENST00000605576 316 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 AL355816.2-201ENST00000610049 647 ntBASIC-0.05□□□□□ -2.42
CCDC58Q4VC31 RNU6-744P-201ENST00000365557 107 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 SNORA4.3-201ENST00000365564 137 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 SNORD116-13-201ENST00000384408 92 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 AL158050.1-201ENST00000416077 457 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 MTND4P20-201ENST00000424125 869 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 ART2BP-201ENST00000453501 499 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 AL122001.1-201ENST00000457027 370 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 U7.7-201ENST00000459276 60 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 snoU109.2-201ENST00000459316 135 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 SNORA59B-202ENST00000578183 701 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 MIR1273C-201ENST00000578669 77 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 AC100812.1-201ENST00000607622 580 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 AC008147.4-201ENST00000617570 1204 ntBASIC-0.06□□□□□ -2.42
CCDC58Q4VC31 SNORD114-16-201ENST00000363044 70 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 SNORD44.1-201ENST00000363202 61 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 RNU4-45P-201ENST00000365469 141 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms