Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RPL9P7-201ENST00000330965 580 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RNU6-78P-201ENST00000362897 107 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RNU6-428P-201ENST00000362942 107 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RNU6-486P-201ENST00000363116 107 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RNU6-1317P-201ENST00000364582 104 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RNU6-1040P-201ENST00000383974 107 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RNU6-933P-201ENST00000384424 107 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 SNORD116-20-201ENST00000384529 92 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RNU6-331P-201ENST00000384724 107 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 SNORA75.6-201ENST00000391318 127 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 USMG5P1-201ENST00000425964 177 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 MICF-203ENST00000432679 129 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 DAP3P1-201ENST00000441522 278 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.32□□□□□ -1.88
LONRF3Q496Y0 AC013470.1-201ENST00000453438 462 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RPL9P9-202ENST00000466501 579 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 AC008571.1-201ENST00000467232 300 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 AC090096.1-201ENST00000489168 390 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 AK3P2-201ENST00000507976 429 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RPL23AP94-201ENST00000512518 302 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RNU6-377P-201ENST00000515965 102 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RNA5SP384-201ENST00000516615 116 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 SCARNA3-201ENST00000517097 143 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.32□□□□□ -1.88
LONRF3Q496Y0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.32□□□□□ -1.88
LONRF3Q496Y0 MIR3976-201ENST00000606807 139 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 uc_338.22-201ENST00000622722 187 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 MIR3529-201ENST00000637713 78 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 U4.7-201ENST00000638126 106 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.32□□□□□ -1.88
LONRF3Q496Y0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LONRF3Q496Y0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LONRF3Q496Y0 RNU1-35P-201ENST00000362782 153 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 Y_RNA.216-201ENST00000364205 93 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 SNORA51.4-201ENST00000364993 124 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 snosnR66.1-201ENST00000391095 99 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 RN7SKP58-201ENST00000411010 305 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 AL451074.5-201ENST00000415894 435 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 SUMO1P4-201ENST00000429430 302 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 UBE2DNL-203ENST00000474922 222 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 AC097462.2-201ENST00000504623 481 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 AC091826.1-201ENST00000514065 313 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 SCARNA16.2-201ENST00000516520 172 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 Y_RNA.711-201ENST00000516993 102 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 SNRPGP18-201ENST00000553000 214 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 AC109446.1-201ENST00000566172 220 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.31□□□□□ -1.88
LONRF3Q496Y0 AC093732.2-201ENST00000607950 274 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 AC096772.1-201ENST00000609146 564 ntBASIC3.31□□□□□ -1.88
LONRF3Q496Y0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LONRF3Q496Y0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
LONRF3Q496Y0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.31□□□□□ -1.88
LONRF3Q496Y0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LONRF3Q496Y0 Y_RNA.31-201ENST00000362574 102 ntBASIC3.3□□□□□ -1.88
LONRF3Q496Y0 Y_RNA.510-201ENST00000384511 114 ntBASIC3.3□□□□□ -1.88
LONRF3Q496Y0 AL137792.2-201ENST00000443484 235 ntBASIC3.3□□□□□ -1.88
LONRF3Q496Y0 RPL23AP49-201ENST00000492925 468 ntBASIC3.3□□□□□ -1.88
LONRF3Q496Y0 SMURF2P1-201ENST00000514992 481 ntBASIC3.3□□□□□ -1.88
LONRF3Q496Y0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.3□□□□□ -1.88
LONRF3Q496Y0 AC069294.1-201ENST00000608397 350 ntBASIC3.3□□□□□ -1.88
LONRF3Q496Y0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LONRF3Q496Y0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LONRF3Q496Y0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LONRF3Q496Y0 RBBP8P1-201ENST00000449447 1844 ntBASIC3.3□□□□□ -1.88
LONRF3Q496Y0 AC000403.1-201ENST00000613696 3585 ntBASIC3.3□□□□□ -1.88
LONRF3Q496Y0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LONRF3Q496Y0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LONRF3Q496Y0 AL161431.1-201ENST00000618966 4205 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 RNU6-1115P-201ENST00000362490 106 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 RNU6-942P-201ENST00000363002 107 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 RNU6-1072P-201ENST00000384703 107 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 RNU6-443P-201ENST00000384780 107 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 RNU6-308P-201ENST00000390957 107 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.29□□□□□ -1.88
LONRF3Q496Y0 AC097463.2-201ENST00000421074 142 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 RPL30P4-201ENST00000429309 333 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.29□□□□□ -1.88
LONRF3Q496Y0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.29□□□□□ -1.88
LONRF3Q496Y0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.29□□□□□ -1.88
LONRF3Q496Y0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.29□□□□□ -1.88
LONRF3Q496Y0 U8.21-201ENST00000459536 136 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 AL163540.1-201ENST00000485382 386 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 ACA59.1-201ENST00000515966 143 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 SNORA43.2-201ENST00000516652 128 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 AC018889.1-201ENST00000605372 397 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 AC005046.1-201ENST00000608515 625 ntBASIC3.29□□□□□ -1.88
LONRF3Q496Y0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.29□□□□□ -1.88
LONRF3Q496Y0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LONRF3Q496Y0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.28□□□□□ -1.88
LONRF3Q496Y0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.28□□□□□ -1.88
LONRF3Q496Y0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LONRF3Q496Y0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
LONRF3Q496Y0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LONRF3Q496Y0 Y_RNA.112-201ENST00000363250 102 ntBASIC3.28□□□□□ -1.88
LONRF3Q496Y0 Y_RNA.162-201ENST00000363683 102 ntBASIC3.28□□□□□ -1.88
LONRF3Q496Y0 RNU6-336P-201ENST00000364891 107 ntBASIC3.28□□□□□ -1.88
LONRF3Q496Y0 RNU6-596P-201ENST00000365395 98 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms