Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 AC015813.6-201ENST00000624409 5808 ntBASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 RNU6-978P-201ENST00000364371 103 ntBASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 Y_RNA.310-201ENST00000365063 113 ntBASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 U1.1-201ENST00000384101 164 ntBASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 RPS4XP2-201ENST00000458402 793 ntBASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 RNU6-1256P-201ENST00000516539 103 ntBASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 RNA5SP395-201ENST00000516567 118 ntBASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 IGKV1-22-201ENST00000524313 326 ntBASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 AC020895.1-201ENST00000595362 272 ntBASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.69□□□□□ -1.66
CTC1Q2NKJ3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 RNU6-799P-201ENST00000363567 107 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 RNU6-1014P-201ENST00000383940 103 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 Y_RNA.456-201ENST00000384232 111 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 MIR544A-201ENST00000384855 91 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 MIR3065-201ENST00000390137 79 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 AL590004.2-201ENST00000404787 371 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 Z85995.1-201ENST00000415547 335 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 AC006026.2-201ENST00000457376 180 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 RNA5SP446-201ENST00000515955 82 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 AC053481.4-201ENST00000583164 216 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 AC079587.1-201ENST00000603846 277 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 AL359198.2-201ENST00000611836 194 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 MAPK10-286ENST00000641208 8747 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 AL136164.3-201ENST00000624429 3978 ntBASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.68□□□□□ -1.66
CTC1Q2NKJ3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 RNU6-1264P-201ENST00000383891 107 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 RNU6-144P-201ENST00000383951 107 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 Y_RNA.415-201ENST00000384012 112 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 RNU6-1113P-201ENST00000384348 107 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 RPL23AP52-201ENST00000439311 478 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 MTND6P33-201ENST00000571794 183 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 RN7SL703P-201ENST00000578485 302 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 AL356157.2-201ENST00000605122 111 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 SNORD115-40-201ENST00000606510 82 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 MIR6875-201ENST00000617506 72 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 AL590808.1-201ENST00000618696 141 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 AC106871.1-201ENST00000568324 3102 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 AP000542.2-201ENST00000623199 6179 ntBASIC4.67□□□□□ -1.66
CTC1Q2NKJ3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 AC092435.4-201ENST00000623012 4159 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 Y_RNA.528-201ENST00000384575 108 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 MIR590-201ENST00000385008 97 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 AC008134.1-201ENST00000420943 193 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 AL162151.2-201ENST00000448875 158 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 AC006517.1-201ENST00000480485 328 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 HMGB1P22-201ENST00000505315 124 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 IGLV3-26-201ENST00000520756 302 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 AC100770.1-201ENST00000532310 322 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 MIR3944-201ENST00000581277 108 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 AC008739.3-201ENST00000603262 127 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 MALAT1.1-201ENST00000618249 95 ntBASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CTC1Q2NKJ3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms