Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU2-53P-201ENST00000516257 147 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AC024909.2-201ENST00000553035 286 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AC243960.4-201ENST00000600532 288 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AC097065.2-201ENST00000608159 533 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AC104073.3-201ENST00000610942 955 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 uc_338.11-201ENST00000619132 160 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 Z69720.2-201ENST00000624755 279 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AC090517.3-201ENST00000625170 141 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 Y_RNA.318-201ENST00000365131 97 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-622P-201ENST00000384272 103 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 RNU1-57P-201ENST00000384491 166 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 Y_RNA.517-201ENST00000384551 106 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 MIR186-201ENST00000384988 86 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-780P-201ENST00000391030 104 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 HMGN2P39-201ENST00000398005 273 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 CALM2P3-201ENST00000400429 449 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AL606923.1-201ENST00000406616 190 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 RNU4-62P-201ENST00000410125 130 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 RNU2-16P-201ENST00000410712 136 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AL031274.1-201ENST00000450334 232 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 RNU7-180P-201ENST00000459240 63 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 CCDC34P1-201ENST00000507441 517 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 LRRC34P2-201ENST00000514850 553 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 SNORA25.15-201ENST00000516487 89 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AL137161.1-201ENST00000532231 390 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 MIR3683-201ENST00000580847 82 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AL031274.2-201ENST00000599419 203 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 AL713866.2-201ENST00000603579 219 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
SHROOM1Q2M3G4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 Y_RNA.41-201ENST00000362646 102 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-266P-201ENST00000364225 107 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 Y_RNA.255-201ENST00000364581 97 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 MIR544A-201ENST00000384855 91 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AL591034.2-201ENST00000402839 359 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AL591043.1-201ENST00000432461 424 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AL645568.3-201ENST00000433683 316 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 SRRM1P2-201ENST00000464531 1192 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AC087884.1-201ENST00000469738 328 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AC107401.1-201ENST00000503426 685 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 MTCYBP40-201ENST00000509390 1135 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 RNA5SP401-201ENST00000515920 127 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AC245505.1-201ENST00000556398 224 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AC093249.1-201ENST00000567049 203 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AC090897.2-201ENST00000581715 130 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AC107304.1-201ENST00000604229 296 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 uc_338.15-201ENST00000615470 191 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 uc_338.34-201ENST00000617467 174 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 AC005609.4-201ENST00000625071 447 ntBASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SHROOM1Q2M3G4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.09□□□□□ -2.08
SHROOM1Q2M3G4 Y_RNA.4-201ENST00000362333 112 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 Y_RNA.164-201ENST00000363709 102 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 RNU4-24P-201ENST00000364565 139 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 U8.10-201ENST00000384260 133 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 RNA5SP219-201ENST00000390940 113 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 OR9R1P-201ENST00000412200 877 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 SNORD56-201ENST00000413522 71 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 AC245102.2-201ENST00000448956 180 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 RPL23AP3-201ENST00000453844 468 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 AC006026.2-201ENST00000457376 180 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-377P-201ENST00000515965 102 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 RNU2-44P-201ENST00000516795 194 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 Y_RNA.704-201ENST00000516851 102 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 SNORA25.17-201ENST00000517184 124 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 MTND4P7-201ENST00000523876 130 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 AP001893.2-201ENST00000526949 202 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 AC124864.2-201ENST00000624736 186 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 ZNF702P-202ENST00000434269 1966 ntBASIC2.08□□□□□ -2.08
SHROOM1Q2M3G4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 RNU4-40P-201ENST00000364351 143 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 Y_RNA.372-201ENST00000365599 102 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms