Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SOX4Q06945 AC106871.1-201ENST00000568324 3102 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SOX4Q06945 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX4Q06945 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 AC092268.1-201ENST00000342691 405 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 RNU6-1272P-201ENST00000362776 107 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 Y_RNA.179-201ENST00000363844 90 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 SNORD74.4-201ENST00000364129 80 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 RNU4-84P-201ENST00000364200 139 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX4Q06945 MIR493-201ENST00000385254 89 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 RNA5SP39-201ENST00000411245 120 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 RNU6-1199P-201ENST00000411249 104 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 ATP5A1P2-201ENST00000412323 255 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX4Q06945 HMGN2P31-201ENST00000432430 273 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 AC244670.1-201ENST00000436879 112 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 SEPT7P4-201ENST00000437076 306 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 AL356535.1-201ENST00000440335 398 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 HMGB3P8-201ENST00000449709 577 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 AL121594.1-201ENST00000475906 575 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 RPS27AP9-201ENST00000477681 438 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 AC106707.2-201ENST00000484182 374 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX4Q06945 RNU6-155P-201ENST00000516347 100 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 Vault.1-201ENST00000516474 102 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 SNORD116-25-201ENST00000516517 92 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX4Q06945 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.99□□□□□ -1.77
SOX4Q06945 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SOX4Q06945 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SOX4Q06945 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SOX4Q06945 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SOX4Q06945 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX4Q06945 LINC02471-203ENST00000641941 4752 ntBASIC3.99□□□□□ -1.77
SOX4Q06945 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SOX4Q06945 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SOX4Q06945 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.98□□□□□ -1.77
SOX4Q06945 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
SOX4Q06945 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SOX4Q06945 Y_RNA.75-201ENST00000362927 97 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 RNU6-1285P-201ENST00000363480 105 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 Y_RNA.182-201ENST00000363880 111 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 RNU6-884P-201ENST00000363889 107 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 RNA5SP167-201ENST00000365461 116 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 RNA5SP424-201ENST00000390988 115 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.98□□□□□ -1.77
SOX4Q06945 AC012306.1-201ENST00000423267 114 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 RAB28P5-201ENST00000427490 651 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 YME1L1P1-201ENST00000429435 297 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.98□□□□□ -1.77
SOX4Q06945 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.98□□□□□ -1.77
SOX4Q06945 AC005840.1-201ENST00000498412 377 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 RNU6-426P-201ENST00000516464 97 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 IGKV2D-19-201ENST00000523346 262 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.98□□□□□ -1.77
SOX4Q06945 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SOX4Q06945 DEFB117-201ENST00000602356 141 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 AC091932.3-201ENST00000624223 323 ntBASIC3.98□□□□□ -1.77
SOX4Q06945 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SOX4Q06945 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.98□□□□□ -1.77
SOX4Q06945 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SOX4Q06945 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SOX4Q06945 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SOX4Q06945 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SOX4Q06945 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SOX4Q06945 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SOX4Q06945 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SOX4Q06945 AC100821.1-201ENST00000523153 2479 ntBASIC3.97□□□□□ -1.77
SOX4Q06945 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
SOX4Q06945 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SOX4Q06945 MIR208A-201ENST00000362287 71 ntBASIC3.97□□□□□ -1.77
SOX4Q06945 Y_RNA.121-201ENST00000363309 113 ntBASIC3.97□□□□□ -1.77
SOX4Q06945 RNU6-151P-201ENST00000364158 107 ntBASIC3.97□□□□□ -1.77
SOX4Q06945 RNU6-818P-201ENST00000364837 108 ntBASIC3.97□□□□□ -1.77
SOX4Q06945 RNA5SP104-201ENST00000410989 118 ntBASIC3.97□□□□□ -1.77
SOX4Q06945 Y_RNA.629-201ENST00000411368 105 ntBASIC3.97□□□□□ -1.77
SOX4Q06945 RPS26P42-201ENST00000413485 326 ntBASIC3.97□□□□□ -1.77
SOX4Q06945 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.97□□□□□ -1.77
SOX4Q06945 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.97□□□□□ -1.77
SOX4Q06945 AC008739.3-201ENST00000603262 127 ntBASIC3.97□□□□□ -1.77
SOX4Q06945 AC069200.1-201ENST00000609511 323 ntBASIC3.97□□□□□ -1.77
SOX4Q06945 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.97□□□□□ -1.77
SOX4Q06945 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.97□□□□□ -1.77
SOX4Q06945 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.97□□□□□ -1.77
SOX4Q06945 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SOX4Q06945 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SOX4Q06945 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SOX4Q06945 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.97□□□□□ -1.77
SOX4Q06945 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SOX4Q06945 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SOX4Q06945 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SOX4Q06945 SNORD9-201ENST00000362566 104 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 RNU6-1280P-201ENST00000365211 107 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 RNU4-17P-201ENST00000365598 141 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 RNU6-1310P-201ENST00000384153 107 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 RNU6-1248P-201ENST00000391096 64 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 489.1 ms