Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RN7SL98P-201ENST00000462271 300 ntBASIC4.69□□□□□ -1.66
USP46P62068 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.69□□□□□ -1.66
USP46P62068 RNU7-115P-201ENST00000516433 55 ntBASIC4.69□□□□□ -1.66
USP46P62068 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.69□□□□□ -1.66
USP46P62068 MIR3138-201ENST00000585238 82 ntBASIC4.69□□□□□ -1.66
USP46P62068 AC108081.1-201ENST00000604358 221 ntBASIC4.69□□□□□ -1.66
USP46P62068 ARF4P1-201ENST00000605447 541 ntBASIC4.69□□□□□ -1.66
USP46P62068 AL110115.1-201ENST00000614396 364 ntBASIC4.69□□□□□ -1.66
USP46P62068 AC114781.5-201ENST00000615297 108 ntBASIC4.69□□□□□ -1.66
USP46P62068 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP46P62068 MIR3914-2-201ENST00000637339 95 ntBASIC4.69□□□□□ -1.66
USP46P62068 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP46P62068 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP46P62068 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP46P62068 AL513302.2-201ENST00000562313 1842 ntBASIC4.69□□□□□ -1.66
USP46P62068 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.69□□□□□ -1.66
USP46P62068 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
USP46P62068 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP46P62068 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
USP46P62068 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.68□□□□□ -1.66
USP46P62068 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP46P62068 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP46P62068 SNORA31-201ENST00000362607 130 ntBASIC4.68□□□□□ -1.66
USP46P62068 Y_RNA.124-201ENST00000363339 93 ntBASIC4.68□□□□□ -1.66
USP46P62068 SNORA70.2-201ENST00000364506 135 ntBASIC4.68□□□□□ -1.66
USP46P62068 RNA5SP151-201ENST00000365632 117 ntBASIC4.68□□□□□ -1.66
USP46P62068 RNU6-1336P-201ENST00000383886 109 ntBASIC4.68□□□□□ -1.66
USP46P62068 RNU2-49P-201ENST00000410666 184 ntBASIC4.68□□□□□ -1.66
USP46P62068 snoU13.14-201ENST00000459372 104 ntBASIC4.68□□□□□ -1.66
USP46P62068 AC109327.1-201ENST00000471666 403 ntBASIC4.68□□□□□ -1.66
USP46P62068 RN7SL810P-201ENST00000493031 276 ntBASIC4.68□□□□□ -1.66
USP46P62068 RNU6-91P-201ENST00000607774 107 ntBASIC4.68□□□□□ -1.66
USP46P62068 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.68□□□□□ -1.66
USP46P62068 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP46P62068 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP46P62068 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP46P62068 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP46P62068 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.67□□□□□ -1.66
USP46P62068 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
USP46P62068 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.67□□□□□ -1.66
USP46P62068 MIR331-201ENST00000362302 94 ntBASIC4.67□□□□□ -1.66
USP46P62068 snoU2_19.1-201ENST00000362361 80 ntBASIC4.67□□□□□ -1.66
USP46P62068 RNU6-147P-201ENST00000383983 107 ntBASIC4.67□□□□□ -1.66
USP46P62068 MIR708-201ENST00000390708 88 ntBASIC4.67□□□□□ -1.66
USP46P62068 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.67□□□□□ -1.66
USP46P62068 RPS3P1-201ENST00000456781 192 ntBASIC4.67□□□□□ -1.66
USP46P62068 AC010618.1-201ENST00000469924 477 ntBASIC4.67□□□□□ -1.66
USP46P62068 RNA5SP446-201ENST00000515955 82 ntBASIC4.67□□□□□ -1.66
USP46P62068 SNORD19.2-201ENST00000516978 73 ntBASIC4.67□□□□□ -1.66
USP46P62068 TRAV8-5-201ENST00000537369 341 ntBASIC4.67□□□□□ -1.66
USP46P62068 MIR378D2-201ENST00000580636 98 ntBASIC4.67□□□□□ -1.66
USP46P62068 MIR3939-201ENST00000582614 106 ntBASIC4.67□□□□□ -1.66
USP46P62068 AC140113.4-201ENST00000622087 222 ntBASIC4.67□□□□□ -1.66
USP46P62068 U6.95-201ENST00000636931 70 ntBASIC4.67□□□□□ -1.66
USP46P62068 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP46P62068 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP46P62068 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP46P62068 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP46P62068 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
USP46P62068 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP46P62068 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.66□□□□□ -1.66
USP46P62068 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.66□□□□□ -1.66
USP46P62068 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP46P62068 RNU6-655P-201ENST00000362858 107 ntBASIC4.66□□□□□ -1.66
USP46P62068 RNU1-20P-201ENST00000363314 162 ntBASIC4.66□□□□□ -1.66
USP46P62068 RNU6-597P-201ENST00000365620 102 ntBASIC4.66□□□□□ -1.66
USP46P62068 AC245047.4-201ENST00000433189 144 ntBASIC4.66□□□□□ -1.66
USP46P62068 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.66□□□□□ -1.66
USP46P62068 PHBP16-201ENST00000446318 950 ntBASIC4.66□□□□□ -1.66
USP46P62068 AL358232.1-201ENST00000448030 501 ntBASIC4.66□□□□□ -1.66
USP46P62068 RPL23AP62-201ENST00000463396 453 ntBASIC4.66□□□□□ -1.66
USP46P62068 RN7SL303P-201ENST00000469773 251 ntBASIC4.66□□□□□ -1.66
USP46P62068 VWA8P1-201ENST00000510889 176 ntBASIC4.66□□□□□ -1.66
USP46P62068 AC093331.1-201ENST00000521474 169 ntBASIC4.66□□□□□ -1.66
USP46P62068 AP004242.1-201ENST00000533701 349 ntBASIC4.66□□□□□ -1.66
USP46P62068 PARP1P2-201ENST00000556806 195 ntBASIC4.66□□□□□ -1.66
USP46P62068 AC006254.2-201ENST00000603259 279 ntBASIC4.66□□□□□ -1.66
USP46P62068 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.66□□□□□ -1.66
USP46P62068 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP46P62068 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.66□□□□□ -1.66
USP46P62068 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP46P62068 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP46P62068 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP46P62068 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP46P62068 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
USP46P62068 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
USP46P62068 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
USP46P62068 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP46P62068 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP46P62068 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.66
USP46P62068 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
USP46P62068 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.65□□□□□ -1.66
USP46P62068 SNORA12-201ENST00000391162 147 ntBASIC4.65□□□□□ -1.67
USP46P62068 MIR921-201ENST00000401133 56 ntBASIC4.65□□□□□ -1.67
USP46P62068 AC011998.1-201ENST00000433403 117 ntBASIC4.65□□□□□ -1.67
USP46P62068 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.65□□□□□ -1.67
USP46P62068 RBMY2UP-201ENST00000453474 324 ntBASIC4.65□□□□□ -1.67
USP46P62068 SNRPGP8-201ENST00000454064 226 ntBASIC4.65□□□□□ -1.67
USP46P62068 RNU6-1061P-201ENST00000516530 99 ntBASIC4.65□□□□□ -1.67
USP46P62068 CYCSP29-201ENST00000533731 318 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms